Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL359314.1-201ENST00000616913 261 ntBASIC2□□□□□ -2.09
CCDC188H7C350 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2□□□□□ -2.09
CCDC188H7C350 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2□□□□□ -2.09
CCDC188H7C350 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2□□□□□ -2.09
CCDC188H7C350 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CCDC188H7C350 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CCDC188H7C350 RNU6-1164P-201ENST00000364428 107 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 RNU6-95P-201ENST00000384697 107 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 MIR320B2-201ENST00000408479 138 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 MIR1283-2-201ENST00000408621 87 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 RNA5SP425-201ENST00000410336 112 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 FCF1P9-201ENST00000412546 282 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC188H7C350 AL356320.1-201ENST00000429616 163 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 DAP3P1-201ENST00000441522 278 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC188H7C350 RNU7-66P-201ENST00000459469 62 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.99□□□□□ -2.09
CCDC188H7C350 ATP5EP1-201ENST00000510257 156 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 AC005034.5-201ENST00000604219 466 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 RPL17P51-201ENST00000605218 238 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 AC005520.5-201ENST00000613926 164 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.99□□□□□ -2.09
CCDC188H7C350 AL138726.1-201ENST00000614873 333 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 U1.36-201ENST00000620684 176 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 MIR219B-201ENST00000637023 88 ntBASIC1.99□□□□□ -2.09
CCDC188H7C350 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC188H7C350 LINC02555-201ENST00000563933 1951 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 CENPCP1-201ENST00000533085 2578 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CCDC188H7C350 Y_RNA.132-201ENST00000363421 102 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 Y_RNA.212-201ENST00000364177 102 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC188H7C350 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC188H7C350 AL023284.1-201ENST00000403956 276 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 MIR1277-201ENST00000408536 78 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 AL356379.1-201ENST00000414105 126 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 Z98742.3-201ENST00000418637 326 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 AC139712.2-201ENST00000424302 339 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 AL513185.2-201ENST00000425543 193 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 MTND2P29-201ENST00000438595 412 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 AC087477.1-201ENST00000465747 340 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 AP005639.2-201ENST00000527592 928 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC188H7C350 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC188H7C350 DEFB122-202ENST00000569013 197 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.98□□□□□ -2.09
CCDC188H7C350 CPDP1-201ENST00000579660 283 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 MIR5006-201ENST00000583027 110 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 AC124303.1-201ENST00000605703 360 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 AC005562.2-201ENST00000618264 111 ntBASIC1.98□□□□□ -2.09
CCDC188H7C350 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
CCDC188H7C350 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.98□□□□□ -2.09
CCDC188H7C350 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CCDC188H7C350 RNU6-306P-201ENST00000384617 107 ntBASIC1.97□□□□□ -2.09
CCDC188H7C350 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CCDC188H7C350 AL158823.1-201ENST00000418441 478 ntBASIC1.97□□□□□ -2.09
CCDC188H7C350 AC123900.1-201ENST00000420390 96 ntBASIC1.97□□□□□ -2.09
CCDC188H7C350 TOMM22P6-201ENST00000465035 409 ntBASIC1.97□□□□□ -2.09
CCDC188H7C350 RPS29P21-201ENST00000496272 170 ntBASIC1.97□□□□□ -2.09
CCDC188H7C350 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC188H7C350 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.97□□□□□ -2.09
CCDC188H7C350 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC188H7C350 AC026470.2-201ENST00000561492 181 ntBASIC1.97□□□□□ -2.09
CCDC188H7C350 MIR4299-201ENST00000577899 72 ntBASIC1.97□□□□□ -2.09
CCDC188H7C350 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.97□□□□□ -2.09
CCDC188H7C350 MIR4648-201ENST00000580107 72 ntBASIC1.97□□□□□ -2.09
CCDC188H7C350 MIR3672-201ENST00000584290 82 ntBASIC1.97□□□□□ -2.09
CCDC188H7C350 MIR3942-201ENST00000585264 109 ntBASIC1.97□□□□□ -2.09
CCDC188H7C350 AP000907.4-201ENST00000604143 237 ntBASIC1.97□□□□□ -2.09
CCDC188H7C350 AC137590.2-201ENST00000619709 240 ntBASIC1.97□□□□□ -2.09
CCDC188H7C350 ZNF355P-201ENST00000427301 3216 ntBASIC1.96□□□□□ -2.09
CCDC188H7C350 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
CCDC188H7C350 AL359851.1-201ENST00000569460 4997 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 RNA5SP493-201ENST00000364115 91 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 SNORA16.1-201ENST00000364597 132 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 SNORD31B-201ENST00000364977 69 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 Y_RNA.332-201ENST00000365271 113 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 RNU6-784P-201ENST00000384330 106 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CCDC188H7C350 AL139396.1-201ENST00000421137 167 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 AL445646.1-201ENST00000431784 216 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 AL139415.2-201ENST00000431968 163 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 RNA5SP233-201ENST00000459153 113 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 RNU2-44P-201ENST00000516795 194 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 RNU1-54P-201ENST00000517181 120 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC188H7C350 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC188H7C350 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC188H7C350 MIR4753-201ENST00000585119 83 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 7SK.7-201ENST00000603504 247 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 AC016727.2-201ENST00000603988 621 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.96□□□□□ -2.1
CCDC188H7C350 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CCDC188H7C350 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC188H7C350 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC188H7C350 RNU5B-2P-201ENST00000363036 113 ntBASIC1.95□□□□□ -2.1
CCDC188H7C350 SNORD116-11-201ENST00000383882 92 ntBASIC1.95□□□□□ -2.1
CCDC188H7C350 RNU6-482P-201ENST00000391068 107 ntBASIC1.95□□□□□ -2.1
CCDC188H7C350 AL356432.1-201ENST00000405809 419 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms