Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 AC093899.1-201ENST00000457984 376 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 AC025465.4-201ENST00000513422 638 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU6-1146P-201ENST00000516282 102 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 AC010620.1-201ENST00000601088 1102 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 AL162424.1-201ENST00000602325 221 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 AL450270.1-201ENST00000606160 391 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 AC231657.1-201ENST00000624313 397 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 AC010487.4-201ENST00000637027 61 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 AC103706.2-201ENST00000638080 240 ntBASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC-0.44□□□□□ -2.48
CHKB-CPT1BH3BT56 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU6-417P-201ENST00000384712 107 ntBASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 MIR1185-1-201ENST00000408598 86 ntBASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 MTCO1P3-201ENST00000429327 192 ntBASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 USP9YP28-201ENST00000435142 589 ntBASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 SNORA59A-201ENST00000459326 152 ntBASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 RPS23P5-201ENST00000495419 428 ntBASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU6-150P-201ENST00000516237 95 ntBASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 TMF1P1-201ENST00000576058 373 ntBASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 AC174048.1-201ENST00000603389 144 ntBASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 AC112187.2-201ENST00000604345 283 ntBASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 UGP2-230ENST00000626380 276 ntTSL 5 BASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC-0.45□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.46□□□□□ -2.48
CHKB-CPT1BH3BT56 AC083799.1-201ENST00000366451 910 ntBASIC-0.46□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU6-278P-201ENST00000390945 109 ntBASIC-0.46□□□□□ -2.48
CHKB-CPT1BH3BT56 RNA5SP63-201ENST00000391225 112 ntBASIC-0.46□□□□□ -2.48
CHKB-CPT1BH3BT56 MRPL42P3-201ENST00000401492 326 ntBASIC-0.46□□□□□ -2.48
CHKB-CPT1BH3BT56 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.46□□□□□ -2.48
CHKB-CPT1BH3BT56 AC245047.3-201ENST00000429428 127 ntBASIC-0.46□□□□□ -2.48
CHKB-CPT1BH3BT56 HSFY7P-201ENST00000432672 318 ntBASIC-0.46□□□□□ -2.48
CHKB-CPT1BH3BT56 HSFY8P-201ENST00000437934 318 ntBASIC-0.46□□□□□ -2.48
CHKB-CPT1BH3BT56 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC-0.46□□□□□ -2.48
CHKB-CPT1BH3BT56 EIF4A1P12-201ENST00000551910 141 ntBASIC-0.46□□□□□ -2.48
CHKB-CPT1BH3BT56 MIR3923-201ENST00000579521 83 ntBASIC-0.46□□□□□ -2.48
CHKB-CPT1BH3BT56 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.46□□□□□ -2.48
CHKB-CPT1BH3BT56 AP000568.1-201ENST00000282964 442 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU6-545P-201ENST00000362681 104 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU5B-1-201ENST00000363286 116 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU6-289P-201ENST00000364093 107 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU6-190P-201ENST00000384154 102 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 MIR145-201ENST00000384967 88 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 MIR610-201ENST00000385139 96 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 MIR300-201ENST00000401138 83 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU4-22P-201ENST00000411058 166 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 AL590135.1-201ENST00000422215 156 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 AC019205.3-201ENST00000424573 156 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 AL353777.1-201ENST00000425552 326 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 AC016700.2-201ENST00000446011 156 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 AC015911.1-201ENST00000495111 156 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU1-117P-201ENST00000517041 158 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 DEFB131D-201ENST00000526803 184 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 AC087883.1-201ENST00000551882 391 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 MIR3612-201ENST00000579753 87 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 AC146944.4-201ENST00000602697 718 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 BCRP9-201ENST00000605312 388 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 AP002360.4-201ENST00000606980 481 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 SNORA25.18-201ENST00000607153 114 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 U6.42-201ENST00000618440 107 ntBASIC-0.47□□□□□ -2.48
CHKB-CPT1BH3BT56 RNU4-56P-201ENST00000364700 142 ntBASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 RPS25P9-201ENST00000435591 252 ntBASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 AP000542.1-201ENST00000448473 371 ntBASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 AC091874.1-201ENST00000511402 339 ntBASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 MIR4300-201ENST00000581016 96 ntBASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 MTND3P19-201ENST00000603825 345 ntBASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 AC112191.3-201ENST00000604371 277 ntBASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 MIR8076-201ENST00000611401 83 ntBASIC-0.48□□□□□ -2.49
CHKB-CPT1BH3BT56 MIR1-1-201ENST00000362147 71 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU6-222P-201ENST00000362438 107 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 MIR214-201ENST00000385214 110 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 RNU1-139P-201ENST00000391307 165 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 MIR1283-1-201ENST00000408494 87 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 SNORD83.1-201ENST00000411362 77 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 AL354692.1-201ENST00000423044 315 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 snoU13.18-201ENST00000459483 104 ntBASIC-0.49□□□□□ -2.49
CHKB-CPT1BH3BT56 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.49□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms