Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 AL353689.1-201ENST00000438895 199 ntBASIC4.2□□□□□ -1.74
H3BM21 ABCF2P2-201ENST00000450549 296 ntBASIC4.2□□□□□ -1.74
H3BM21 AC099522.1-202ENST00000514718 367 ntBASIC4.2□□□□□ -1.74
H3BM21 RNU7-116P-201ENST00000516940 62 ntBASIC4.2□□□□□ -1.74
H3BM21 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.2□□□□□ -1.74
H3BM21 AC006064.5-201ENST00000541782 248 ntBASIC4.2□□□□□ -1.74
H3BM21 AC084364.2-201ENST00000546924 395 ntBASIC4.2□□□□□ -1.74
H3BM21 MED28P6-201ENST00000558776 231 ntBASIC4.2□□□□□ -1.74
H3BM21 MTND6P33-201ENST00000571794 183 ntBASIC4.2□□□□□ -1.74
H3BM21 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.2□□□□□ -1.74
H3BM21 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
H3BM21 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3BM21 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
H3BM21 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3BM21 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3BM21 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
H3BM21 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
H3BM21 AC068254.2-201ENST00000623938 3577 ntBASIC4.19□□□□□ -1.74
H3BM21 RNU1-108P-201ENST00000362556 161 ntBASIC4.19□□□□□ -1.74
H3BM21 Y_RNA.198-201ENST00000364013 98 ntBASIC4.19□□□□□ -1.74
H3BM21 SNORA4.2-201ENST00000365313 147 ntBASIC4.19□□□□□ -1.74
H3BM21 RNU6-979P-201ENST00000383896 107 ntBASIC4.19□□□□□ -1.74
H3BM21 SNORD116-13-201ENST00000384408 92 ntBASIC4.19□□□□□ -1.74
H3BM21 AC125238.1-201ENST00000448842 249 ntBASIC4.19□□□□□ -1.74
H3BM21 MLLT10P2-201ENST00000506434 249 ntBASIC4.19□□□□□ -1.74
H3BM21 SNORD77.4-201ENST00000516158 81 ntBASIC4.19□□□□□ -1.74
H3BM21 AL365205.2-201ENST00000594586 68 ntBASIC4.19□□□□□ -1.74
H3BM21 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.19□□□□□ -1.74
H3BM21 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
H3BM21 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
H3BM21 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
H3BM21 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
H3BM21 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
H3BM21 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
H3BM21 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.18□□□□□ -1.74
H3BM21 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
H3BM21 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.18□□□□□ -1.74
H3BM21 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
H3BM21 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
H3BM21 RNA5SP513-201ENST00000364648 118 ntBASIC4.18□□□□□ -1.74
H3BM21 AL356095.1-201ENST00000417217 199 ntBASIC4.18□□□□□ -1.74
H3BM21 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC4.18□□□□□ -1.74
H3BM21 AC005921.1-201ENST00000510589 286 ntBASIC4.18□□□□□ -1.74
H3BM21 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC4.18□□□□□ -1.74
H3BM21 RNU1-103P-201ENST00000516502 125 ntBASIC4.18□□□□□ -1.74
H3BM21 RNU6-1337P-201ENST00000516525 95 ntBASIC4.18□□□□□ -1.74
H3BM21 MIR5588-201ENST00000581890 63 ntBASIC4.18□□□□□ -1.74
H3BM21 SNORD98-201ENST00000636377 67 ntBASIC4.18□□□□□ -1.74
H3BM21 AC011266.1-201ENST00000624119 3569 ntBASIC4.18□□□□□ -1.74
H3BM21 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
H3BM21 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.18□□□□□ -1.74
H3BM21 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
H3BM21 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.18□□□□□ -1.74
H3BM21 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
H3BM21 AC016588.2-201ENST00000632484 3021 ntBASIC4.17□□□□□ -1.74
H3BM21 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
H3BM21 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
H3BM21 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
H3BM21 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
H3BM21 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
H3BM21 Y_RNA.213-201ENST00000364178 111 ntBASIC4.17□□□□□ -1.74
H3BM21 AL359837.1-201ENST00000381357 287 ntBASIC4.17□□□□□ -1.74
H3BM21 SNORA26-201ENST00000391286 122 ntBASIC4.17□□□□□ -1.74
H3BM21 MIR1179-201ENST00000408703 91 ntBASIC4.17□□□□□ -1.74
H3BM21 NDUFB4P6-201ENST00000436819 366 ntBASIC4.17□□□□□ -1.74
H3BM21 AL162151.2-201ENST00000448875 158 ntBASIC4.17□□□□□ -1.74
H3BM21 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.17□□□□□ -1.74
H3BM21 RPS26P28-201ENST00000470806 348 ntBASIC4.17□□□□□ -1.74
H3BM21 AC011406.1-201ENST00000512440 370 ntBASIC4.17□□□□□ -1.74
H3BM21 SCARNA23-201ENST00000516060 130 ntBASIC4.17□□□□□ -1.74
H3BM21 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.17□□□□□ -1.74
H3BM21 AC007751.1-201ENST00000529260 376 ntBASIC4.17□□□□□ -1.74
H3BM21 AC027176.1-201ENST00000560204 514 ntBASIC4.17□□□□□ -1.74
H3BM21 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.17□□□□□ -1.74
H3BM21 AC018692.3-201ENST00000623929 123 ntBASIC4.17□□□□□ -1.74
H3BM21 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
H3BM21 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.17□□□□□ -1.74
H3BM21 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
H3BM21 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.17□□□□□ -1.74
H3BM21 AL136964.1-201ENST00000622038 2990 ntBASIC4.16□□□□□ -1.74
H3BM21 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
H3BM21 Y_RNA.265-201ENST00000364677 108 ntBASIC4.16□□□□□ -1.74
H3BM21 RNU6-675P-201ENST00000384236 104 ntBASIC4.16□□□□□ -1.74
H3BM21 RPL21P65-201ENST00000406094 466 ntBASIC4.16□□□□□ -1.74
H3BM21 AC027124.2-201ENST00000428249 105 ntBASIC4.16□□□□□ -1.74
H3BM21 AL117339.2-201ENST00000430475 180 ntBASIC4.16□□□□□ -1.74
H3BM21 RNU7-171P-201ENST00000459581 62 ntBASIC4.16□□□□□ -1.74
H3BM21 RPL23AP67-201ENST00000465341 474 ntBASIC4.16□□□□□ -1.74
H3BM21 RPS29P19-201ENST00000479709 171 ntBASIC4.16□□□□□ -1.74
H3BM21 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.16□□□□□ -1.74
H3BM21 PPBPP1-201ENST00000510807 373 ntBASIC4.16□□□□□ -1.74
H3BM21 RNU6-830P-201ENST00000516353 107 ntBASIC4.16□□□□□ -1.74
H3BM21 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
H3BM21 RN7SL600P-201ENST00000581811 299 ntBASIC4.16□□□□□ -1.74
H3BM21 uc_338.32-201ENST00000615087 172 ntBASIC4.16□□□□□ -1.74
H3BM21 uc_338.4-201ENST00000616635 176 ntBASIC4.16□□□□□ -1.74
H3BM21 MIR6134-201ENST00000617606 109 ntBASIC4.16□□□□□ -1.74
H3BM21 AC005562.2-201ENST00000618264 111 ntBASIC4.16□□□□□ -1.74
H3BM21 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.16□□□□□ -1.74
H3BM21 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms