Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC4.51□□□□□ -1.69
RCCD1A6NED2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
RCCD1A6NED2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RCCD1A6NED2 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RCCD1A6NED2 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
RCCD1A6NED2 AC058791.1-201ENST00000608412 3198 ntBASIC4.51□□□□□ -1.69
RCCD1A6NED2 AC087190.4-201ENST00000574616 8334 ntBASIC4.5□□□□□ -1.69
RCCD1A6NED2 AL136360.1-201ENST00000503377 1900 ntBASIC4.5□□□□□ -1.69
RCCD1A6NED2 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RCCD1A6NED2 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.5□□□□□ -1.69
RCCD1A6NED2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RCCD1A6NED2 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.5□□□□□ -1.69
RCCD1A6NED2 AC010300.1-201ENST00000600671 5134 ntBASIC4.5□□□□□ -1.69
RCCD1A6NED2 Y_RNA.163-201ENST00000363702 113 ntBASIC4.5□□□□□ -1.69
RCCD1A6NED2 Y_RNA.558-201ENST00000384685 113 ntBASIC4.5□□□□□ -1.69
RCCD1A6NED2 MIR1294-201ENST00000408503 142 ntBASIC4.5□□□□□ -1.69
RCCD1A6NED2 RNA5SP136-201ENST00000410906 107 ntBASIC4.5□□□□□ -1.69
RCCD1A6NED2 Y_RNA.625-201ENST00000411256 107 ntBASIC4.5□□□□□ -1.69
RCCD1A6NED2 AL157831.1-201ENST00000426134 473 ntBASIC4.5□□□□□ -1.69
RCCD1A6NED2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.5□□□□□ -1.69
RCCD1A6NED2 HMGN2P16-201ENST00000456802 261 ntBASIC4.5□□□□□ -1.69
RCCD1A6NED2 RNU6-365P-201ENST00000517113 106 ntBASIC4.5□□□□□ -1.69
RCCD1A6NED2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.5□□□□□ -1.69
RCCD1A6NED2 AC009831.4-201ENST00000620744 325 ntBASIC4.5□□□□□ -1.69
RCCD1A6NED2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.5□□□□□ -1.69
RCCD1A6NED2 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
RCCD1A6NED2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RCCD1A6NED2 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.49□□□□□ -1.69
RCCD1A6NED2 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RCCD1A6NED2 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
RCCD1A6NED2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RCCD1A6NED2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RCCD1A6NED2 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RCCD1A6NED2 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RCCD1A6NED2 RNU6-1209P-201ENST00000363655 107 ntBASIC4.49□□□□□ -1.69
RCCD1A6NED2 Y_RNA.796-201ENST00000364268 102 ntBASIC4.49□□□□□ -1.69
RCCD1A6NED2 Y_RNA.799-201ENST00000364992 102 ntBASIC4.49□□□□□ -1.69
RCCD1A6NED2 SNORA51.5-201ENST00000384126 131 ntBASIC4.49□□□□□ -1.69
RCCD1A6NED2 MIR562-201ENST00000384894 95 ntBASIC4.49□□□□□ -1.69
RCCD1A6NED2 MIR570-201ENST00000384917 97 ntBASIC4.49□□□□□ -1.69
RCCD1A6NED2 RNA5SP354-201ENST00000391247 136 ntBASIC4.49□□□□□ -1.69
RCCD1A6NED2 HMGN2P32-201ENST00000444648 269 ntBASIC4.49□□□□□ -1.69
RCCD1A6NED2 AC006463.2-201ENST00000473326 348 ntBASIC4.49□□□□□ -1.69
RCCD1A6NED2 ATP5EP1-201ENST00000510257 156 ntBASIC4.49□□□□□ -1.69
RCCD1A6NED2 RNU6-948P-201ENST00000516374 107 ntBASIC4.49□□□□□ -1.69
RCCD1A6NED2 AP006289.1-201ENST00000538089 277 ntBASIC4.49□□□□□ -1.69
RCCD1A6NED2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.49□□□□□ -1.69
RCCD1A6NED2 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.49□□□□□ -1.69
RCCD1A6NED2 MIR7703-201ENST00000620784 77 ntBASIC4.49□□□□□ -1.69
RCCD1A6NED2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RCCD1A6NED2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
RCCD1A6NED2 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.49□□□□□ -1.69
RCCD1A6NED2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC4.49□□□□□ -1.69
RCCD1A6NED2 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.49□□□□□ -1.69
RCCD1A6NED2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RCCD1A6NED2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RCCD1A6NED2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RCCD1A6NED2 SNORA11F-201ENST00000408237 128 ntBASIC4.48□□□□□ -1.69
RCCD1A6NED2 SNORA3C-201ENST00000408792 125 ntBASIC4.48□□□□□ -1.69
RCCD1A6NED2 RN7SKP177-201ENST00000410567 355 ntBASIC4.48□□□□□ -1.69
RCCD1A6NED2 AC008134.1-201ENST00000420943 193 ntBASIC4.48□□□□□ -1.69
RCCD1A6NED2 AC097463.2-201ENST00000421074 142 ntBASIC4.48□□□□□ -1.69
RCCD1A6NED2 EIF4EP4-201ENST00000424916 578 ntBASIC4.48□□□□□ -1.69
RCCD1A6NED2 AC016717.1-201ENST00000448918 286 ntBASIC4.48□□□□□ -1.69
RCCD1A6NED2 RPS29P33-201ENST00000456717 146 ntBASIC4.48□□□□□ -1.69
RCCD1A6NED2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RCCD1A6NED2 S100A11P1-201ENST00000477525 312 ntBASIC4.48□□□□□ -1.69
RCCD1A6NED2 RPS27P22-201ENST00000478056 241 ntBASIC4.48□□□□□ -1.69
RCCD1A6NED2 MIR449C-201ENST00000516047 92 ntBASIC4.48□□□□□ -1.69
RCCD1A6NED2 AC025647.1-201ENST00000517879 253 ntBASIC4.48□□□□□ -1.69
RCCD1A6NED2 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.48□□□□□ -1.69
RCCD1A6NED2 AC007751.1-201ENST00000529260 376 ntBASIC4.48□□□□□ -1.69
RCCD1A6NED2 AC096577.2-201ENST00000611455 153 ntBASIC4.48□□□□□ -1.69
RCCD1A6NED2 MIR4727-201ENST00000622232 55 ntBASIC4.48□□□□□ -1.69
RCCD1A6NED2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC4.48□□□□□ -1.69
RCCD1A6NED2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RCCD1A6NED2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RCCD1A6NED2 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC4.48□□□□□ -1.69
RCCD1A6NED2 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.48□□□□□ -1.69
RCCD1A6NED2 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.48□□□□□ -1.69
RCCD1A6NED2 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RCCD1A6NED2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RCCD1A6NED2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.48□□□□□ -1.69
RCCD1A6NED2 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RCCD1A6NED2 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RCCD1A6NED2 SNORA56-201ENST00000383966 129 ntBASIC4.47□□□□□ -1.69
RCCD1A6NED2 Y_RNA.486-201ENST00000384398 107 ntBASIC4.47□□□□□ -1.69
RCCD1A6NED2 RNU6-113P-201ENST00000516653 101 ntBASIC4.47□□□□□ -1.69
RCCD1A6NED2 MIR7702-201ENST00000621931 59 ntBASIC4.47□□□□□ -1.69
RCCD1A6NED2 AC090517.3-201ENST00000625170 141 ntBASIC4.47□□□□□ -1.69
RCCD1A6NED2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RCCD1A6NED2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RCCD1A6NED2 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RCCD1A6NED2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
RCCD1A6NED2 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.46□□□□□ -1.69
RCCD1A6NED2 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.46□□□□□ -1.7
RCCD1A6NED2 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
RCCD1A6NED2 Y_RNA.66-201ENST00000362862 102 ntBASIC4.46□□□□□ -1.7
RCCD1A6NED2 RNU6-1131P-201ENST00000364955 107 ntBASIC4.46□□□□□ -1.7
RCCD1A6NED2 SNORD31B-201ENST00000364977 69 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms