Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 BMS1P22-201ENST00000414726 313 ntBASIC4.3□□□□□ -1.72
USP17L4A6NCW7 HMGN2P20-201ENST00000437531 273 ntBASIC4.3□□□□□ -1.72
USP17L4A6NCW7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.3□□□□□ -1.72
USP17L4A6NCW7 Z75741.1-201ENST00000446793 314 ntBASIC4.3□□□□□ -1.72
USP17L4A6NCW7 RPS26P15-201ENST00000488067 348 ntBASIC4.3□□□□□ -1.72
USP17L4A6NCW7 SNORA31.1-201ENST00000515993 133 ntBASIC4.3□□□□□ -1.72
USP17L4A6NCW7 SNORA31.5-201ENST00000516190 133 ntBASIC4.3□□□□□ -1.72
USP17L4A6NCW7 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.3□□□□□ -1.72
USP17L4A6NCW7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.3□□□□□ -1.72
USP17L4A6NCW7 AL713866.2-201ENST00000603579 219 ntBASIC4.3□□□□□ -1.72
USP17L4A6NCW7 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
USP17L4A6NCW7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.3□□□□□ -1.72
USP17L4A6NCW7 AL136164.4-201ENST00000625013 2135 ntBASIC4.3□□□□□ -1.72
USP17L4A6NCW7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
USP17L4A6NCW7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
USP17L4A6NCW7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP17L4A6NCW7 AF127577.6-201ENST00000623352 2191 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 snoU2_19.1-201ENST00000362361 80 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 Y_RNA.23-201ENST00000362496 106 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
USP17L4A6NCW7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP17L4A6NCW7 RNA5SP104-201ENST00000410989 118 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 MTATP6P29-201ENST00000415057 132 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 RPS27AP9-201ENST00000477681 438 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 AC093663.1-201ENST00000497190 394 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 AC005840.1-201ENST00000498412 377 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 HSPE1P18-201ENST00000517602 280 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 AC136628.3-201ENST00000521868 290 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 AC100767.1-201ENST00000528178 123 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.29□□□□□ -1.72
USP17L4A6NCW7 AL670379.2-201ENST00000604983 252 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 RPL17P51-201ENST00000605218 238 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 MIR7112-201ENST00000616126 65 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 AP003355.3-201ENST00000623465 114 ntBASIC4.29□□□□□ -1.72
USP17L4A6NCW7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
USP17L4A6NCW7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.29□□□□□ -1.72
USP17L4A6NCW7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.29□□□□□ -1.72
USP17L4A6NCW7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP17L4A6NCW7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP17L4A6NCW7 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP17L4A6NCW7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP17L4A6NCW7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP17L4A6NCW7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP17L4A6NCW7 Y_RNA.75-201ENST00000362927 97 ntBASIC4.28□□□□□ -1.72
USP17L4A6NCW7 U3.8-201ENST00000363675 217 ntBASIC4.28□□□□□ -1.72
USP17L4A6NCW7 Y_RNA.182-201ENST00000363880 111 ntBASIC4.28□□□□□ -1.72
USP17L4A6NCW7 MIR767-201ENST00000390228 109 ntBASIC4.28□□□□□ -1.72
USP17L4A6NCW7 RPS20P10-201ENST00000451209 253 ntBASIC4.28□□□□□ -1.72
USP17L4A6NCW7 AC025445.1-201ENST00000502728 300 ntBASIC4.28□□□□□ -1.72
USP17L4A6NCW7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.28□□□□□ -1.72
USP17L4A6NCW7 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.28□□□□□ -1.72
USP17L4A6NCW7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.28□□□□□ -1.72
USP17L4A6NCW7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.28□□□□□ -1.72
USP17L4A6NCW7 AC008873.1-201ENST00000625051 138 ntBASIC4.28□□□□□ -1.72
USP17L4A6NCW7 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.28□□□□□ -1.72
USP17L4A6NCW7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
USP17L4A6NCW7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP17L4A6NCW7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP17L4A6NCW7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP17L4A6NCW7 RNA5SP295-201ENST00000362655 121 ntBASIC4.27□□□□□ -1.73
USP17L4A6NCW7 RNU1-105P-201ENST00000363470 161 ntBASIC4.27□□□□□ -1.73
USP17L4A6NCW7 Y_RNA.287-201ENST00000364853 94 ntBASIC4.27□□□□□ -1.73
USP17L4A6NCW7 Y_RNA.357-201ENST00000365487 109 ntBASIC4.27□□□□□ -1.73
USP17L4A6NCW7 RNU6-449P-201ENST00000383914 107 ntBASIC4.27□□□□□ -1.73
USP17L4A6NCW7 Y_RNA.412-201ENST00000384001 104 ntBASIC4.27□□□□□ -1.73
USP17L4A6NCW7 RNU6-1077P-201ENST00000410506 102 ntBASIC4.27□□□□□ -1.73
USP17L4A6NCW7 AC004552.1-201ENST00000419089 348 ntBASIC4.27□□□□□ -1.73
USP17L4A6NCW7 AC010469.1-201ENST00000463864 576 ntBASIC4.27□□□□□ -1.73
USP17L4A6NCW7 SNRPGP3-201ENST00000469405 227 ntBASIC4.27□□□□□ -1.73
USP17L4A6NCW7 RPS26P3-201ENST00000470205 348 ntBASIC4.27□□□□□ -1.73
USP17L4A6NCW7 AC090543.2-201ENST00000483963 348 ntBASIC4.27□□□□□ -1.73
USP17L4A6NCW7 AC004057.1-201ENST00000485827 348 ntBASIC4.27□□□□□ -1.73
USP17L4A6NCW7 SRIP1-201ENST00000489235 288 ntBASIC4.27□□□□□ -1.73
USP17L4A6NCW7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.27□□□□□ -1.73
USP17L4A6NCW7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP17L4A6NCW7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP17L4A6NCW7 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
USP17L4A6NCW7 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP17L4A6NCW7 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP17L4A6NCW7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
USP17L4A6NCW7 Y_RNA.243-201ENST00000364481 109 ntBASIC4.26□□□□□ -1.73
USP17L4A6NCW7 RNU6-1081P-201ENST00000384537 107 ntBASIC4.26□□□□□ -1.73
USP17L4A6NCW7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.26□□□□□ -1.73
USP17L4A6NCW7 RNA5SP39-201ENST00000411245 120 ntBASIC4.26□□□□□ -1.73
USP17L4A6NCW7 IGKV2-26-201ENST00000518305 343 ntBASIC4.26□□□□□ -1.73
USP17L4A6NCW7 AL353746.1-201ENST00000566293 6881 ntBASIC4.26□□□□□ -1.73
USP17L4A6NCW7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP17L4A6NCW7 AC010329.5-201ENST00000623497 2174 ntBASIC4.26□□□□□ -1.73
USP17L4A6NCW7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP17L4A6NCW7 Y_RNA.343-201ENST00000365354 112 ntBASIC4.25□□□□□ -1.73
USP17L4A6NCW7 RNU6-1130P-201ENST00000365434 107 ntBASIC4.25□□□□□ -1.73
USP17L4A6NCW7 RNU6-81P-201ENST00000365608 104 ntBASIC4.25□□□□□ -1.73
USP17L4A6NCW7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.25□□□□□ -1.73
USP17L4A6NCW7 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.25□□□□□ -1.73
USP17L4A6NCW7 AL031183.1-201ENST00000457667 207 ntBASIC4.25□□□□□ -1.73
USP17L4A6NCW7 U8.19-201ENST00000459095 133 ntBASIC4.25□□□□□ -1.73
USP17L4A6NCW7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.25□□□□□ -1.73
USP17L4A6NCW7 RN7SKP209-201ENST00000516888 304 ntBASIC4.25□□□□□ -1.73
USP17L4A6NCW7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms