Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 snoU2-30.2-201ENST00000362805 70 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 U3.4-201ENST00000363352 213 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-61P-201ENST00000365528 109 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-25P-201ENST00000383873 107 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-48P-201ENST00000384161 107 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-15P-201ENST00000384534 107 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-29P-201ENST00000384637 107 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC078809.1-201ENST00000427601 140 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 MTCO3P18-201ENST00000440206 761 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RPS20P10-201ENST00000451209 253 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RPS23P5-201ENST00000495419 428 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC105758.1-201ENST00000506038 399 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 MTCO3P7-201ENST00000510008 774 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-377P-201ENST00000515965 102 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 SNORA31.10-201ENST00000516482 106 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC090517.1-201ENST00000569307 266 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AL158042.1-201ENST00000605338 460 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC009994.1-201ENST00000606889 253 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 AC106858.1-201ENST00000637497 429 ntBASIC0.35□□□□□ -2.35
TCRBV4S1A1TA0A5B7 RNU6-428P-201ENST00000362942 107 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU4-12P-201ENST00000365233 139 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-809P-201ENST00000384461 107 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-1031P-201ENST00000384773 107 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MTCYBP36-201ENST00000404146 440 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC007283.2-201ENST00000424739 197 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC010154.1-201ENST00000425857 269 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 HMGN2P34-201ENST00000437647 269 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-685P-201ENST00000517088 95 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 DEFB131C-201ENST00000528817 165 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 TMF1P1-201ENST00000576058 373 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL390123.1-201ENST00000603216 237 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL513534.2-201ENST00000603836 250 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 Z98751.3-201ENST00000604447 521 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RPL17P51-201ENST00000605218 238 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL353765.1-201ENST00000605514 183 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC009229.3-201ENST00000608056 282 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AP001596.2-201ENST00000608410 312 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC019226.2-201ENST00000625973 424 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 SNORD3E-202ENST00000627253 216 ntBASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
TCRBV4S1A1TA0A5B7 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC092268.1-201ENST00000342691 405 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-552P-201ENST00000362869 119 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU4-41P-201ENST00000364426 143 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MIR558-201ENST00000384920 94 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MIR10B-201ENST00000385011 110 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-757P-201ENST00000410334 100 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU2-39P-201ENST00000410604 198 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC005534.2-201ENST00000431047 433 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL133396.1-201ENST00000432048 687 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 SNAP23P1-201ENST00000433229 246 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RPL22P17-201ENST00000438729 315 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL133217.1-201ENST00000450980 425 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC091874.1-201ENST00000511402 339 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC116347.2-201ENST00000514912 523 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU4-54P-201ENST00000516428 129 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU2-34P-201ENST00000516534 121 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNA5SP121-201ENST00000516537 101 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC092451.2-201ENST00000538746 658 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 BNIP3P40-201ENST00000596017 556 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC068790.6-201ENST00000602558 258 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC080078.2-201ENST00000603766 501 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL031281.1-201ENST00000604049 488 ntBASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
TCRBV4S1A1TA0A5B7 Y_RNA.22-201ENST00000362492 102 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 VTRNA1-3-201ENST00000365645 89 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 SNORA36A-201ENST00000384221 132 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RNU6-110P-201ENST00000384508 104 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 SNORD41-201ENST00000386967 70 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 SNORA12.1-201ENST00000390873 148 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 MED13P1-201ENST00000428342 171 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 TIMM9P3-201ENST00000428659 274 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AL035398.1-201ENST00000430869 322 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 RPS24P1-201ENST00000438550 371 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 AC013470.1-201ENST00000453438 462 ntBASIC0.32□□□□□ -2.36
TCRBV4S1A1TA0A5B7 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms