Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 MIR4325-201ENST00000583049 90 ntBASIC3.15□□□□□ -1.91
HS3ST4Q9Y661 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.15□□□□□ -1.91
HS3ST4Q9Y661 AC091152.3-201ENST00000604227 325 ntBASIC3.15□□□□□ -1.91
HS3ST4Q9Y661 AC037487.3-201ENST00000606668 112 ntBASIC3.15□□□□□ -1.91
HS3ST4Q9Y661 AC024581.2-201ENST00000619986 252 ntBASIC3.15□□□□□ -1.91
HS3ST4Q9Y661 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
HS3ST4Q9Y661 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.15□□□□□ -1.91
HS3ST4Q9Y661 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AL157777.2-201ENST00000258070 137 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 Y_RNA.44-201ENST00000362676 108 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 SNORA71.1-201ENST00000364523 117 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 RNU6-142P-201ENST00000384019 107 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 RNU6-318P-201ENST00000384283 103 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 RNU6-378P-201ENST00000384324 107 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 SNORD116-20-201ENST00000384529 92 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 SNORA19-201ENST00000384737 128 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 RNU1-139P-201ENST00000391307 165 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 FTH1P15-201ENST00000406984 280 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AL358075.3-201ENST00000426289 226 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AC009414.1-201ENST00000427200 443 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AL392103.1-201ENST00000447000 198 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AL031659.1-201ENST00000447075 539 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AL441985.1-201ENST00000457727 251 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 RPS29P12-201ENST00000460178 152 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AF186996.7-201ENST00000492781 209 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AC091874.1-201ENST00000511402 339 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 SNORA25.14-201ENST00000516481 132 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AC024405.2-202ENST00000532731 184 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AL391813.1-201ENST00000603098 260 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AL133393.1-201ENST00000603277 287 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 SNORD113-5-201ENST00000607261 78 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AL162274.2-201ENST00000614406 332 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 AC127459.3-201ENST00000624328 466 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
HS3ST4Q9Y661 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 MIR411-201ENST00000362239 96 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 RNU6-858P-201ENST00000362436 107 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 RNU6-545P-201ENST00000362681 104 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 SNORD56.1-201ENST00000362913 68 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 RNU1-140P-201ENST00000365040 165 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 RNU6-746P-201ENST00000384112 109 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 RNU6-748P-201ENST00000384648 107 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 MIR128-1-201ENST00000384921 82 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 MIR634-201ENST00000385208 97 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 SNORA48.5-201ENST00000391143 135 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 SNORA48.8-201ENST00000391324 134 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 SNORD12B-201ENST00000410433 91 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 AC005002.2-201ENST00000438228 269 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 SNRPGP7-201ENST00000469016 106 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 AC107626.1-201ENST00000471084 183 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 AC117440.1-201ENST00000474107 571 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 SEPT14P8-201ENST00000508026 178 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 AP002392.1-201ENST00000537692 208 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 AC009163.5-201ENST00000575421 637 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 AC099778.2-201ENST00000610904 211 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 UCA1.1-201ENST00000620952 75 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 SNORA50A-202ENST00000629536 136 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 HAUS6P2-201ENST00000433254 2404 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 ZNF826P-207ENST00000622273 1910 ntBASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.13□□□□□ -1.91
HS3ST4Q9Y661 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 RNA5SP361-201ENST00000362686 118 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 RNU6-805P-201ENST00000365643 106 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 SNORA29-201ENST00000384183 140 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 RNU6-21P-201ENST00000384710 107 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 MIR147B-201ENST00000390185 80 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 RNU4-30P-201ENST00000410245 143 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 AC012308.1-201ENST00000451232 178 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 RNU5F-8P-201ENST00000515941 111 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 RNU7-110P-201ENST00000516891 62 ntBASIC3.12□□□□□ -1.91
HS3ST4Q9Y661 RNU2-31P-201ENST00000516954 155 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms