Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.51□□□□□ -2.01
CLDN16Q9Y5I7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 RNU1-72P-201ENST00000362976 153 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 Y_RNA.463-201ENST00000384271 102 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 RNU6-378P-201ENST00000384324 107 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 MIR625-201ENST00000385047 85 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 MIR190B-201ENST00000401119 79 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 Y_RNA.597-201ENST00000410463 100 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 AC099799.1-201ENST00000439809 192 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 OR2AQ1P-201ENST00000451972 200 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 AP000705.1-201ENST00000454567 350 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 SNORD116.3-201ENST00000517176 78 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 MIR5701-3-201ENST00000578890 82 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 MIR4672-201ENST00000583126 81 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 MIR5701-1-201ENST00000585138 82 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 AL355297.2-201ENST00000604792 129 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 AL138963.2-201ENST00000605137 226 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 AL355802.3-201ENST00000607571 545 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 MIR5701-2-201ENST00000615634 82 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 AC007336.1-201ENST00000576365 3828 ntBASIC2.5□□□□□ -2.01
CLDN16Q9Y5I7 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 Y_RNA.138-201ENST00000363462 102 ntBASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 SNORA5B-201ENST00000363786 132 ntBASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 U3.9-201ENST00000363823 204 ntBASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 SNORD115-32-201ENST00000364079 82 ntBASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 RNU4-76P-201ENST00000364509 141 ntBASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 RNA5SP240-201ENST00000365355 128 ntBASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 RNU6-1274P-201ENST00000384557 107 ntBASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 RNU6-1011P-201ENST00000384668 107 ntBASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 SNORA46.1-201ENST00000391069 153 ntBASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 Y_RNA.605-201ENST00000410577 105 ntBASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 AC063976.3-201ENST00000426849 329 ntBASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 AL161788.1-201ENST00000441805 169 ntBASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 RNA5SP282-201ENST00000516355 108 ntBASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 RNU7-4P-201ENST00000516961 62 ntBASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 PCGEM1.1-201ENST00000613431 131 ntBASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CLDN16Q9Y5I7 MAPK10-266ENST00000641066 6555 ntBASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 Z82209.1-201ENST00000422141 2135 ntBASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 Y_RNA.128-201ENST00000363391 112 ntBASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 SNORD42.2-201ENST00000365570 69 ntBASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 RNU1-52P-201ENST00000384190 164 ntBASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 MIR487A-201ENST00000385009 80 ntBASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 SNORA12-201ENST00000391162 147 ntBASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 RNA5SP184-201ENST00000411071 108 ntBASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 MRPS18CP6-201ENST00000423587 223 ntBASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 Y_RNA.639-201ENST00000458981 102 ntBASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 RNU7-169P-201ENST00000459456 61 ntBASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 RNU6-1198P-201ENST00000516904 67 ntBASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 EIF4A1P12-201ENST00000551910 141 ntBASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 SNRPGP18-201ENST00000553000 214 ntBASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 AL049779.4-201ENST00000604500 156 ntBASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.48□□□□□ -2.01
CLDN16Q9Y5I7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 ZNF271P-202ENST00000465539 1970 ntBASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 RNU6-1115P-201ENST00000362490 106 ntBASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 RNU6-859P-201ENST00000362728 107 ntBASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 Y_RNA.106-201ENST00000363189 100 ntBASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 RNA5SP125-201ENST00000364843 120 ntBASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 Y_RNA.319-201ENST00000365138 92 ntBASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 RNU6-17P-201ENST00000384245 107 ntBASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 RNU6-18P-201ENST00000384527 107 ntBASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 RNU6-308P-201ENST00000390957 107 ntBASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 MIR1302-11-201ENST00000408051 138 ntBASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 MIR1302-9-201ENST00000408365 138 ntBASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 SNORD88.1-201ENST00000408684 91 ntBASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 MIR1302-10-201ENST00000408734 138 ntBASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 AL354751.2-201ENST00000415471 210 ntBASIC2.47□□□□□ -2.01
CLDN16Q9Y5I7 AC011753.1-201ENST00000451001 220 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms