Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 RNU6-626P-201ENST00000363354 107 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 RNU5F-3P-201ENST00000363767 117 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 RNU6-961P-201ENST00000363893 105 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 SNORA44-201ENST00000384584 132 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 AL133475.1-201ENST00000404414 305 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 AL441985.1-201ENST00000457727 251 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 SNORA40.9-201ENST00000515895 93 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 RNA5SP217-201ENST00000515959 91 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 SNORA31.1-201ENST00000515993 133 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 RNU5F-2P-201ENST00000516066 82 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 SNORA31.5-201ENST00000516190 133 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 Y_RNA.700-201ENST00000516806 100 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 LARP7P3-201ENST00000579888 337 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 AL391813.1-201ENST00000603098 260 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 AC093732.2-201ENST00000607950 274 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 AC010999.1-201ENST00000611856 324 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 U2.14-201ENST00000615943 113 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 BX322639.1-202ENST00000423987 2213 ntBASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHA2Q9Y5H9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 RNU6-529P-201ENST00000363383 104 ntBASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 SNORD6-201ENST00000365444 73 ntBASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 RNU6-20P-201ENST00000384106 107 ntBASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 Y_RNA.785-201ENST00000384290 109 ntBASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 U3.26-201ENST00000391236 204 ntBASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 RN7SKP220-201ENST00000410611 288 ntBASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 AC010095.1-201ENST00000443543 144 ntBASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 SNORA59A-201ENST00000459326 152 ntBASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 snoU13.14-201ENST00000459372 104 ntBASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 AC117440.1-201ENST00000474107 571 ntBASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 SNORA31.21-201ENST00000517180 77 ntBASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 AL137843.1-201ENST00000605078 385 ntBASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCDHA2Q9Y5H9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
PCDHA2Q9Y5H9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 Y_RNA.40-201ENST00000362645 93 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 Y_RNA.65-201ENST00000362846 100 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 Y_RNA.230-201ENST00000364348 109 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 RNU4-56P-201ENST00000364700 142 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 Y_RNA.286-201ENST00000364813 102 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 SNORA54-201ENST00000384281 123 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 RNU4-70P-201ENST00000384579 139 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 SNORD15B-201ENST00000384714 146 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 Y_RNA.570-201ENST00000384750 101 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 MIR147B-201ENST00000390185 80 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AL033519.2-201ENST00000403958 392 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 RNU4-30P-201ENST00000410245 143 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 Y_RNA.595-201ENST00000410403 105 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AL390729.2-201ENST00000416137 156 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AC138623.1-201ENST00000418060 216 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AL365496.1-201ENST00000426885 215 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AC007395.1-201ENST00000451333 677 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AL136097.1-201ENST00000456945 913 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 RPL23AP62-201ENST00000463396 453 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AC025281.1-201ENST00000567026 265 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AC130289.1-201ENST00000577321 73 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AL356575.1-201ENST00000603008 283 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AC012531.5-201ENST00000611375 151 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 AL357075.2-201ENST00000614906 189 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 SCARNA15.3-201ENST00000626315 122 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 SCARNA4.1-201ENST00000628597 123 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 ZNF204P-201ENST00000416749 2397 ntBASIC3.46□□□□□ -1.86
PCDHA2Q9Y5H9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 RNA5SP295-201ENST00000362655 121 ntBASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 RNU6-799P-201ENST00000363567 107 ntBASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 Y_RNA.269-201ENST00000364685 89 ntBASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 RNU6-326P-201ENST00000365480 107 ntBASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 RNU6-209P-201ENST00000384118 107 ntBASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 COTL1P1-201ENST00000422309 375 ntBASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 MTND5P15-201ENST00000434246 349 ntBASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 SNORA25.14-201ENST00000516481 132 ntBASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 Y_RNA.683-201ENST00000516508 93 ntBASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 RNU7-110P-201ENST00000516891 62 ntBASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 CYCSP23-201ENST00000519781 313 ntBASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 AC068657.1-201ENST00000520807 306 ntBASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 AC233702.2-202ENST00000562547 291 ntBASIC3.45□□□□□ -1.86
PCDHA2Q9Y5H9 MIR4643-201ENST00000577473 78 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms