Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 CR392039.5-201ENST00000623201 510 ntBASIC3.28□□□□□ -1.88
TSC22D4Q9Y3Q8 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
TSC22D4Q9Y3Q8 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
TSC22D4Q9Y3Q8 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.28□□□□□ -1.89
TSC22D4Q9Y3Q8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 SNORA71.3-201ENST00000362582 128 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 Y_RNA.182-201ENST00000363880 111 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 Y_RNA.218-201ENST00000364218 104 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 Y_RNA.357-201ENST00000365487 109 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 U8.10-201ENST00000384260 133 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 RPL27AP8-201ENST00000424277 446 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 AC243964.1-201ENST00000441814 261 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 AC124916.1-201ENST00000444020 547 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 FCF1P8-201ENST00000510322 597 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 RNU6-1333P-201ENST00000516162 93 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 SNORA43.2-201ENST00000516652 128 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 RNU6-919P-201ENST00000516731 104 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 MIR2276-201ENST00000516886 89 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 AC233702.2-202ENST00000562547 291 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 AL359881.1-201ENST00000602916 267 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 AC068831.7-201ENST00000616954 363 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 AL034408.1-202ENST00000636088 415 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 AL353743.1-202ENST00000431724 1695 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 AC010332.2-201ENST00000613083 1904 ntBASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
TSC22D4Q9Y3Q8 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 AC110774.1-201ENST00000623567 2018 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 RNU6-312P-201ENST00000364629 107 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 RNU6-741P-201ENST00000383889 107 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 SNORD17-201ENST00000390930 237 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 RNU6-159P-201ENST00000391080 106 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 AC138623.1-201ENST00000418060 216 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 NDUFB4P7-201ENST00000423198 363 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 AC098614.2-201ENST00000426040 255 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 AL358232.1-201ENST00000448030 501 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 RPS27AP9-201ENST00000477681 438 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 AC006483.1-201ENST00000487308 313 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 RNU6-191P-201ENST00000516295 94 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 AC245166.1-201ENST00000521012 253 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 AC022441.3-201ENST00000605737 136 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 SCARNA4-202ENST00000625402 129 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 AC073476.4-201ENST00000628409 72 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 SNORA43.4-201ENST00000629559 138 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 U6.99-201ENST00000637524 83 ntBASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
TSC22D4Q9Y3Q8 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 AL355596.1-201ENST00000565399 3996 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 Y_RNA.23-201ENST00000362496 106 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 RNU5B-2P-201ENST00000363036 113 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 RNA5SP197-201ENST00000363357 119 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 SNORA20-201ENST00000384662 132 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 RNU2-68P-201ENST00000410878 191 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 AC093578.1-201ENST00000415219 368 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 EIF1AXP1-201ENST00000419267 435 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 BTF3P11-201ENST00000426582 477 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 AC244505.4-201ENST00000434905 287 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 SSXP5-201ENST00000443473 287 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 AC010095.1-201ENST00000443543 144 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 AC005042.3-201ENST00000453230 174 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 HMGN1P18-201ENST00000457642 277 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 RNU6-1234P-201ENST00000516877 103 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 RNU6-58P-201ENST00000517143 103 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 IGKV2-26-201ENST00000518305 343 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 MIR4474-201ENST00000579189 78 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 MIR3684-201ENST00000579779 74 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 AC090132.2-201ENST00000615881 347 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 AC027309.3-201ENST00000623419 351 ntBASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
TSC22D4Q9Y3Q8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TSC22D4Q9Y3Q8 RNU6-600P-201ENST00000362524 99 ntBASIC3.24□□□□□ -1.89
TSC22D4Q9Y3Q8 Y_RNA.71-201ENST00000362892 104 ntBASIC3.24□□□□□ -1.89
TSC22D4Q9Y3Q8 Y_RNA.127-201ENST00000363386 109 ntBASIC3.24□□□□□ -1.89
TSC22D4Q9Y3Q8 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
TSC22D4Q9Y3Q8 RNU6-1325P-201ENST00000364905 105 ntBASIC3.24□□□□□ -1.89
TSC22D4Q9Y3Q8 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms