Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNA5SP196-201ENST00000625967 102 ntBASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM35Q9UPQ4 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM35Q9UPQ4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM35Q9UPQ4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM35Q9UPQ4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
TRIM35Q9UPQ4 RNA5SP511-201ENST00000410487 115 ntBASIC5.46□□□□□ -1.54
TRIM35Q9UPQ4 RNU6-938P-201ENST00000411285 103 ntBASIC5.46□□□□□ -1.54
TRIM35Q9UPQ4 AC080013.2-201ENST00000460866 323 ntBASIC5.46□□□□□ -1.54
TRIM35Q9UPQ4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM35Q9UPQ4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM35Q9UPQ4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM35Q9UPQ4 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 AC107027.3-201ENST00000565095 3473 ntBASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 RNU6-1209P-201ENST00000363655 107 ntBASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 RNU6-219P-201ENST00000364728 107 ntBASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 SNORA37-201ENST00000384504 129 ntBASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 SNORA70C-201ENST00000384538 135 ntBASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 MIR889-201ENST00000401280 79 ntBASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 AL031121.1-201ENST00000406553 254 ntBASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 AC006011.1-201ENST00000442758 349 ntBASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 AC245102.2-201ENST00000448956 180 ntBASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 RPS27AP10-201ENST00000496103 208 ntBASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 RNU6-1282P-201ENST00000516735 96 ntBASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 AC109329.2-201ENST00000519658 482 ntBASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM35Q9UPQ4 ANKRD20A9P-201ENST00000457997 2978 ntBASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 RNA5SP130-201ENST00000364431 114 ntBASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 RNU1-13P-201ENST00000384499 162 ntBASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 MIR181A2-201ENST00000384863 110 ntBASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 MIR1179-201ENST00000408703 91 ntBASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 HMGN2P10-201ENST00000448085 265 ntBASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 AC010598.1-201ENST00000510378 103 ntBASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 RNA5SP20-201ENST00000515976 84 ntBASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 AC107934.2-201ENST00000518653 310 ntBASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 MIR3163-201ENST00000581592 73 ntBASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 AC012531.4-201ENST00000616509 177 ntBASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 AC083843.2-201ENST00000568248 6253 ntBASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM35Q9UPQ4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
TRIM35Q9UPQ4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM35Q9UPQ4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM35Q9UPQ4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM35Q9UPQ4 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
TRIM35Q9UPQ4 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
TRIM35Q9UPQ4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.43□□□□□ -1.54
TRIM35Q9UPQ4 HSPE1P7-201ENST00000604681 321 ntBASIC5.43□□□□□ -1.54
TRIM35Q9UPQ4 MIR432-201ENST00000606207 94 ntBASIC5.43□□□□□ -1.54
TRIM35Q9UPQ4 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.43□□□□□ -1.54
TRIM35Q9UPQ4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM35Q9UPQ4 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
TRIM35Q9UPQ4 AC058791.1-201ENST00000608412 3198 ntBASIC5.43□□□□□ -1.54
TRIM35Q9UPQ4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM35Q9UPQ4 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRIM35Q9UPQ4 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRIM35Q9UPQ4 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.42□□□□□ -1.54
TRIM35Q9UPQ4 Y_RNA.298-201ENST00000364960 107 ntBASIC5.42□□□□□ -1.54
TRIM35Q9UPQ4 RNU6-690P-201ENST00000365242 106 ntBASIC5.42□□□□□ -1.54
TRIM35Q9UPQ4 RNU6-652P-201ENST00000365488 107 ntBASIC5.42□□□□□ -1.54
TRIM35Q9UPQ4 RNA5SP354-201ENST00000391247 136 ntBASIC5.42□□□□□ -1.54
TRIM35Q9UPQ4 SNORD65B-201ENST00000459126 73 ntBASIC5.42□□□□□ -1.54
TRIM35Q9UPQ4 AC145146.1-201ENST00000496370 254 ntBASIC5.42□□□□□ -1.54
TRIM35Q9UPQ4 RNU6-795P-201ENST00000516323 103 ntBASIC5.42□□□□□ -1.54
TRIM35Q9UPQ4 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.42□□□□□ -1.54
TRIM35Q9UPQ4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TRIM35Q9UPQ4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 MIR372-201ENST00000362225 67 ntBASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 RNU6-170P-201ENST00000362832 104 ntBASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 RNU1-72P-201ENST00000362976 153 ntBASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 SNORA33-201ENST00000363664 130 ntBASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 AL139095.1-201ENST00000404326 391 ntBASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 AC063976.3-201ENST00000426849 329 ntBASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 HLA-N-201ENST00000437516 135 ntBASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 SUMO2P16-201ENST00000519475 264 ntBASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 FAS-AS1.2-201ENST00000620386 170 ntBASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC5.41□□□□□ -1.54
TRIM35Q9UPQ4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms