Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC106785.1-201ENST00000565935 262 ntBASIC3.77□□□□□ -1.81
AP4E1Q9UPM8 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.77□□□□□ -1.81
AP4E1Q9UPM8 MIR3923-201ENST00000579521 83 ntBASIC3.77□□□□□ -1.81
AP4E1Q9UPM8 AC011471.1-201ENST00000585766 187 ntBASIC3.77□□□□□ -1.81
AP4E1Q9UPM8 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.77□□□□□ -1.81
AP4E1Q9UPM8 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
AP4E1Q9UPM8 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
AP4E1Q9UPM8 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.77□□□□□ -1.81
AP4E1Q9UPM8 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
AP4E1Q9UPM8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
AP4E1Q9UPM8 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
AP4E1Q9UPM8 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 RNU6-103P-201ENST00000363686 107 ntBASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 Y_RNA.261-201ENST00000364631 102 ntBASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 RNU6-283P-201ENST00000364788 107 ntBASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 SNORA40-201ENST00000388090 126 ntBASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 AL031003.1-201ENST00000404229 172 ntBASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 MTND4LP9-201ENST00000427694 174 ntBASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 RNU6-344P-201ENST00000516635 111 ntBASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 AC021269.2-201ENST00000532318 330 ntBASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 MIR4744-201ENST00000581563 82 ntBASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 MIR3199-2-201ENST00000636243 86 ntBASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 MIR3658-201ENST00000636291 56 ntBASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
AP4E1Q9UPM8 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 AC000403.1-201ENST00000613696 3585 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 AC010329.5-201ENST00000623497 2174 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 RNU6-899P-201ENST00000363947 107 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 RNU4-10P-201ENST00000364383 140 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 RNA5SP51-201ENST00000364750 119 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 RNU4-11P-201ENST00000365287 132 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 SNORA72.4-201ENST00000384174 132 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 Z98941.1-201ENST00000407764 100 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 RHEBP3-201ENST00000411920 351 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 CRYBB2P1-203ENST00000415709 538 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 AC017083.1-201ENST00000428093 483 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 AC114982.1-201ENST00000469402 321 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 AC107027.2-201ENST00000512197 115 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 SNORA25.12-201ENST00000516202 82 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 SNORD11B-201ENST00000607707 90 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 PCGEM1.1-201ENST00000613431 131 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 AC134026.1-201ENST00000623249 2239 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 AL672296.1-201ENST00000427780 2158 ntBASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
AP4E1Q9UPM8 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 CUL1P1-201ENST00000509510 2425 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 Y_RNA.127-201ENST00000363386 109 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 RNA5SP42-201ENST00000364278 115 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 Y_RNA.273-201ENST00000364703 102 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 SNORD87-201ENST00000364849 89 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 Y_RNA.353-201ENST00000365440 108 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 MIR626-201ENST00000385032 94 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 AC023141.4-201ENST00000412031 328 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 AL159169.1-201ENST00000421119 127 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 PTGES3P4-201ENST00000426243 356 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 AC006989.1-201ENST00000427212 131 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 AL137159.1-201ENST00000452808 512 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 HMGN2P16-201ENST00000456802 261 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 snoU13.14-201ENST00000459372 104 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 RPS4XP13-201ENST00000483219 789 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 RNU6-107P-201ENST00000516643 102 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 RNU6-971P-201ENST00000516920 106 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 AC091152.3-201ENST00000604227 325 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 AC069200.1-201ENST00000609511 323 ntBASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.74□□□□□ -1.81
AP4E1Q9UPM8 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 RNU1-75P-201ENST00000347264 129 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 Y_RNA.287-201ENST00000364853 94 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 Y_RNA.361-201ENST00000365515 120 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 RNU6-748P-201ENST00000384648 107 ntBASIC3.73□□□□□ -1.81
AP4E1Q9UPM8 SNORA1.3-201ENST00000384676 136 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms