Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHA4Q9UN74 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.83□□□□□ -1.8
PCDHA4Q9UN74 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
PCDHA4Q9UN74 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 AP002088.1-201ENST00000382740 395 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 RNU6-1310P-201ENST00000384153 107 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 MIR7-3-201ENST00000384898 110 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 MIR184-201ENST00000384962 84 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 RNA5SP171-201ENST00000391071 115 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 CBX3P9-201ENST00000402326 552 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 MIR320B2-201ENST00000408479 138 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 OOSP1P1-201ENST00000423265 274 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 YME1L1P1-201ENST00000429435 297 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 SNRPGP5-201ENST00000456003 220 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 RPL21P10-201ENST00000463521 490 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 AC091021.1-201ENST00000468051 388 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 NDUFB9P3-201ENST00000521269 501 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 MIR3145-201ENST00000580727 82 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 MIR4276-201ENST00000584832 70 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 RPS15AP11-201ENST00000594193 385 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 SNRPGP20-201ENST00000604477 205 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 AL162713.1-201ENST00000604480 262 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 AL034555.1-201ENST00000604816 211 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 AC068831.7-201ENST00000616954 363 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 AC002076.2-201ENST00000617362 122 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
PCDHA4Q9UN74 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 Y_RNA.304-201ENST00000365011 112 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 SNORA18.3-201ENST00000384122 132 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 MIR23B-201ENST00000384832 97 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 AL133475.1-201ENST00000404414 305 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 RNU2-54P-201ENST00000410299 190 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 TMSB4XP3-201ENST00000445144 114 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 AL358232.1-201ENST00000448030 501 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 AC010099.1-201ENST00000455434 375 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 AC103975.1-201ENST00000482506 483 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 RNU6-155P-201ENST00000516347 100 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 AP002001.1-203ENST00000534002 267 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 MIR4644-201ENST00000579929 84 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 RMST_8.1-201ENST00000610287 165 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 snoU18.1-201ENST00000629629 71 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 MIR3674-201ENST00000636576 68 ntBASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.81□□□□□ -1.8
PCDHA4Q9UN74 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 Z83843.1-201ENST00000604070 3685 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 AC002546.1-201ENST00000588041 2504 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 RNU1-70P-201ENST00000362618 164 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 RNU6-529P-201ENST00000363383 104 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 RNU6-727P-201ENST00000363592 107 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 Y_RNA.262-201ENST00000364641 102 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 SNORD113-1-201ENST00000365321 69 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 RNU6-211P-201ENST00000384047 107 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 MIR548I2-201ENST00000408348 149 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 RNU6-394P-201ENST00000410735 107 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 AC024067.1-201ENST00000426199 223 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 AC010401.1-201ENST00000463867 348 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 RPS29P26-201ENST00000477483 171 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 RNU7-200P-201ENST00000516105 62 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 RNU6-1231P-201ENST00000517185 103 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 AC012314.7-201ENST00000619693 93 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 AL365265.1-201ENST00000621045 234 ntBASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.8□□□□□ -1.8
PCDHA4Q9UN74 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 Y_RNA.40-201ENST00000362645 93 ntBASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 RNU6-1010P-201ENST00000362757 107 ntBASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 RNU6-804P-201ENST00000384286 107 ntBASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 RNA5SP201-201ENST00000410316 124 ntBASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 AC009963.1-201ENST00000417265 157 ntBASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 snoU13.14-201ENST00000459372 104 ntBASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 RNU7-23P-201ENST00000459465 62 ntBASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 RNU6-1219P-201ENST00000516143 112 ntBASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 AP000867.2-201ENST00000532468 320 ntBASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 MIR5692C2-201ENST00000577959 77 ntBASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 MIR3144-201ENST00000579460 79 ntBASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 DEFB117-201ENST00000602356 141 ntBASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 uc_338.1-201ENST00000612113 180 ntBASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 AF117829.1-206ENST00000621883 3802 ntBASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.79□□□□□ -1.8
PCDHA4Q9UN74 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms