Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PACSIN3Q9UKS6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 AC008568.2-201ENST00000623862 2313 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 SNORD56.1-201ENST00000362913 68 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Y_RNA.82-201ENST00000363000 102 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Y_RNA.92-201ENST00000363043 102 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Y_RNA.235-201ENST00000364412 102 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Y_RNA.240-201ENST00000364469 95 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Y_RNA.306-201ENST00000365015 102 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Y_RNA.308-201ENST00000365043 101 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Y_RNA.312-201ENST00000365089 102 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Y_RNA.319-201ENST00000365138 92 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Y_RNA.322-201ENST00000365151 102 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 RNU6-1175P-201ENST00000365200 107 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 RNY1P5-201ENST00000383890 115 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Y_RNA.398-201ENST00000383952 99 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 SNORA36A-201ENST00000384221 132 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 SNORD116-20-201ENST00000384529 92 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Y_RNA.570-201ENST00000384750 101 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 RNU6-1135P-201ENST00000411083 103 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 RPL19P1-201ENST00000411635 428 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 EIF1AXP1-201ENST00000419267 435 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 YPEL5P1-201ENST00000419731 367 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 AL590383.1-201ENST00000428602 75 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 RPS12P18-201ENST00000442381 270 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 BX510359.1-201ENST00000456973 237 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Y_RNA.650-201ENST00000459002 102 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 RNU1-61P-201ENST00000516107 151 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 RNU6-1219P-201ENST00000516143 112 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 SNORA27.4-201ENST00000516650 95 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Y_RNA.777-201ENST00000516982 102 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 AP004607.1-201ENST00000524456 203 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 AC055872.1-201ENST00000570978 278 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 MIR548AI-201ENST00000579940 88 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 MIR4276-201ENST00000584832 70 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Y_RNA.771-201ENST00000598668 102 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 AC099778.2-201ENST00000610904 211 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 AL357075.2-201ENST00000614906 189 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Y_RNA.789-201ENST00000622480 102 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 AL353743.1-202ENST00000431724 1695 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 Z83843.1-201ENST00000604070 3685 ntBASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.03□□□□□ -1.92
PACSIN3Q9UKS6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
PACSIN3Q9UKS6 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 UBE2WP1-201ENST00000362030 340 ntBASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 MIR410-201ENST00000362222 80 ntBASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 RNU6-1145P-201ENST00000384246 107 ntBASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 RNU6-159P-201ENST00000391080 106 ntBASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 AP001324.2-201ENST00000461163 319 ntBASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 RNU6-966P-201ENST00000516479 104 ntBASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 RNU6-58P-201ENST00000517143 103 ntBASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 MIR4308-201ENST00000580634 81 ntBASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 AC005828.6-201ENST00000606610 232 ntBASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 FTX_3.1-201ENST00000610451 147 ntBASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 MIR3651-201ENST00000630427 90 ntBASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 U2.21-201ENST00000637295 81 ntBASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PACSIN3Q9UKS6 AC002546.1-201ENST00000588041 2504 ntBASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 RNU6-778P-201ENST00000363269 103 ntBASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 RNU6-514P-201ENST00000384208 107 ntBASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 MIR181B1-201ENST00000385240 110 ntBASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 MIR493-201ENST00000385254 89 ntBASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 AL451074.5-201ENST00000415894 435 ntBASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 AC005300.1-201ENST00000428401 373 ntBASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 AC007969.2-201ENST00000441891 191 ntBASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 snoU13.6-201ENST00000458785 104 ntBASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 AP004217.1-201ENST00000480579 346 ntBASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 SNORA40.9-201ENST00000515895 93 ntBASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 MIR3200-201ENST00000580767 85 ntBASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 AC006001.4-201ENST00000622243 395 ntBASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.01□□□□□ -1.93
PACSIN3Q9UKS6 AL161431.1-201ENST00000618966 4205 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms