Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 RNA5SP201-201ENST00000410316 124 ntBASIC3.77□□□□□ -1.81
DDX41Q9UJV9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.77□□□□□ -1.81
DDX41Q9UJV9 EIF4EP4-201ENST00000424916 578 ntBASIC3.77□□□□□ -1.81
DDX41Q9UJV9 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX41Q9UJV9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.77□□□□□ -1.81
DDX41Q9UJV9 RPS29P12-201ENST00000460178 152 ntBASIC3.77□□□□□ -1.81
DDX41Q9UJV9 AC146507.2-201ENST00000460608 476 ntBASIC3.77□□□□□ -1.81
DDX41Q9UJV9 Y_RNA.683-201ENST00000516508 93 ntBASIC3.77□□□□□ -1.81
DDX41Q9UJV9 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.77□□□□□ -1.81
DDX41Q9UJV9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
DDX41Q9UJV9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
DDX41Q9UJV9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
DDX41Q9UJV9 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.76□□□□□ -1.81
DDX41Q9UJV9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
DDX41Q9UJV9 snoU2_19.1-201ENST00000362361 80 ntBASIC3.76□□□□□ -1.81
DDX41Q9UJV9 RNU4-15P-201ENST00000362613 141 ntBASIC3.76□□□□□ -1.81
DDX41Q9UJV9 RNA5SP374-201ENST00000362939 125 ntBASIC3.76□□□□□ -1.81
DDX41Q9UJV9 RNU6-793P-201ENST00000384233 104 ntBASIC3.76□□□□□ -1.81
DDX41Q9UJV9 SNORD115-46-201ENST00000390982 71 ntBASIC3.76□□□□□ -1.81
DDX41Q9UJV9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.76□□□□□ -1.81
DDX41Q9UJV9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.76□□□□□ -1.81
DDX41Q9UJV9 AC006028.1-201ENST00000438379 402 ntBASIC3.76□□□□□ -1.81
DDX41Q9UJV9 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.76□□□□□ -1.81
DDX41Q9UJV9 RPL27AP5-201ENST00000469428 449 ntBASIC3.76□□□□□ -1.81
DDX41Q9UJV9 TRBVB-201ENST00000477100 408 ntBASIC3.76□□□□□ -1.81
DDX41Q9UJV9 RNU6-408P-201ENST00000515910 100 ntBASIC3.76□□□□□ -1.81
DDX41Q9UJV9 SNORA70.19-201ENST00000516717 90 ntBASIC3.76□□□□□ -1.81
DDX41Q9UJV9 RNU6-570P-201ENST00000517051 105 ntBASIC3.76□□□□□ -1.81
DDX41Q9UJV9 RPL30P11-203ENST00000598995 310 ntBASIC3.76□□□□□ -1.81
DDX41Q9UJV9 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC3.76□□□□□ -1.81
DDX41Q9UJV9 AC110774.1-201ENST00000623567 2018 ntBASIC3.76□□□□□ -1.81
DDX41Q9UJV9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
DDX41Q9UJV9 MAPK10-362ENST00000641864 4484 ntBASIC3.75□□□□□ -1.81
DDX41Q9UJV9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
DDX41Q9UJV9 Y_RNA.26-201ENST00000362539 101 ntBASIC3.75□□□□□ -1.81
DDX41Q9UJV9 RNU1-62P-201ENST00000362599 164 ntBASIC3.75□□□□□ -1.81
DDX41Q9UJV9 SNORA18.3-201ENST00000384122 132 ntBASIC3.75□□□□□ -1.81
DDX41Q9UJV9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.75□□□□□ -1.81
DDX41Q9UJV9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX41Q9UJV9 CBX3P6-201ENST00000430257 527 ntBASIC3.75□□□□□ -1.81
DDX41Q9UJV9 AC010095.1-201ENST00000443543 144 ntBASIC3.75□□□□□ -1.81
DDX41Q9UJV9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX41Q9UJV9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX41Q9UJV9 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX41Q9UJV9 MIR4300-201ENST00000581016 96 ntBASIC3.75□□□□□ -1.81
DDX41Q9UJV9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
DDX41Q9UJV9 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX41Q9UJV9 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
DDX41Q9UJV9 AC093831.2-201ENST00000624393 3427 ntBASIC3.74□□□□□ -1.81
DDX41Q9UJV9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.74□□□□□ -1.81
DDX41Q9UJV9 AP003122.5-201ENST00000527668 3766 ntBASIC3.74□□□□□ -1.81
DDX41Q9UJV9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.74□□□□□ -1.81
DDX41Q9UJV9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.74□□□□□ -1.81
DDX41Q9UJV9 Y_RNA.462-201ENST00000384268 102 ntBASIC3.74□□□□□ -1.81
DDX41Q9UJV9 Y_RNA.489-201ENST00000384410 101 ntBASIC3.74□□□□□ -1.81
DDX41Q9UJV9 MIR29B2-201ENST00000385055 81 ntBASIC3.74□□□□□ -1.81
DDX41Q9UJV9 SNORA48.5-201ENST00000391143 135 ntBASIC3.74□□□□□ -1.81
DDX41Q9UJV9 RNU4-47P-201ENST00000410876 114 ntBASIC3.74□□□□□ -1.81
DDX41Q9UJV9 RNU5A-5P-201ENST00000411054 116 ntBASIC3.74□□□□□ -1.81
DDX41Q9UJV9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.74□□□□□ -1.81
DDX41Q9UJV9 AC103975.1-201ENST00000482506 483 ntBASIC3.74□□□□□ -1.81
DDX41Q9UJV9 SNORA40.9-201ENST00000515895 93 ntBASIC3.74□□□□□ -1.81
DDX41Q9UJV9 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.74□□□□□ -1.81
DDX41Q9UJV9 AC073657.2-201ENST00000605661 303 ntBASIC3.74□□□□□ -1.81
DDX41Q9UJV9 SCARNA15.3-201ENST00000626315 122 ntBASIC3.74□□□□□ -1.81
DDX41Q9UJV9 SCARNA4.1-201ENST00000628597 123 ntBASIC3.74□□□□□ -1.81
DDX41Q9UJV9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.74□□□□□ -1.81
DDX41Q9UJV9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
DDX41Q9UJV9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
DDX41Q9UJV9 AC010329.5-201ENST00000623497 2174 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
DDX41Q9UJV9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
DDX41Q9UJV9 MTND5P35-201ENST00000557537 1720 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
DDX41Q9UJV9 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.73□□□□□ -1.81
DDX41Q9UJV9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.73□□□□□ -1.81
DDX41Q9UJV9 SNORD63-201ENST00000384262 68 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 RNU6-472P-201ENST00000384299 107 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 MT-TW-201ENST00000387382 68 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.73□□□□□ -1.81
DDX41Q9UJV9 AC007395.1-201ENST00000451333 677 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 AC091179.1-201ENST00000461606 579 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 AC073901.1-201ENST00000462471 408 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 CENPBD1P1-201ENST00000464061 469 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.73□□□□□ -1.81
DDX41Q9UJV9 AC074133.1-201ENST00000515696 183 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 RNA5SP385-201ENST00000515947 110 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 HSPE1P18-201ENST00000517602 280 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.73□□□□□ -1.81
DDX41Q9UJV9 AC005562.2-201ENST00000618264 111 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 AC018692.3-201ENST00000623929 123 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 AC073476.4-201ENST00000628409 72 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 MIR7157-201ENST00000635801 60 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 MIR7515-201ENST00000637837 67 ntBASIC3.73□□□□□ -1.81
DDX41Q9UJV9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
DDX41Q9UJV9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
DDX41Q9UJV9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
DDX41Q9UJV9 AC010615.1-201ENST00000594254 1764 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 Y_RNA.105-201ENST00000363182 111 ntBASIC3.72□□□□□ -1.81
DDX41Q9UJV9 Y_RNA.483-201ENST00000384380 101 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms