Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AL133396.1-201ENST00000432048 687 ntBASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 AC016700.2-201ENST00000446011 156 ntBASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 PRELID3BP1-201ENST00000457142 540 ntBASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 RNU1-123P-201ENST00000458950 160 ntBASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 AC015911.1-201ENST00000495111 156 ntBASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 CCDC34P1-201ENST00000507441 517 ntBASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 MIR3660-201ENST00000584845 100 ntBASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 AC092747.3-201ENST00000603769 301 ntBASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 AC063943.3-201ENST00000615562 356 ntBASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.91□□□□□ -2.1
NPC1L1Q9UHC9 SNORD32A-201ENST00000364805 84 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 Y_RNA.409-201ENST00000383990 98 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 MIR518A2-201ENST00000384966 87 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 BTF3L4P2-201ENST00000392798 346 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 AL513185.2-201ENST00000425543 193 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 RPL23AP95-201ENST00000426806 265 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 PTP4A1P4-201ENST00000512479 322 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 Y_RNA.693-201ENST00000516641 110 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 SNORD60.2-201ENST00000516883 86 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 AL512360.1-201ENST00000555346 234 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 AC021231.3-201ENST00000558497 370 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 MIR4299-201ENST00000577899 72 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 MIR3923-201ENST00000579521 83 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 AP001836.1-201ENST00000604675 523 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 MTND5P35-201ENST00000557537 1720 ntBASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
NPC1L1Q9UHC9 Y_RNA.191-201ENST00000363972 113 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 RNU4-24P-201ENST00000364565 139 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 RNU6-38P-201ENST00000384085 107 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 SNORD14D-201ENST00000384390 87 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 RNA5SP465-201ENST00000391195 109 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 AL357139.1-201ENST00000407792 426 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 SEPT14P3-201ENST00000439401 183 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 AL732372.2-207ENST00000445840 183 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 SEPT14P2-201ENST00000453405 183 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 RNU6-333P-201ENST00000459117 107 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 HMGN1P7-201ENST00000491722 313 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 AC145146.1-201ENST00000496370 254 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 MTCYBP18-201ENST00000501056 747 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 AC114801.2-201ENST00000503825 781 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 SEPT14P4-201ENST00000513445 186 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 RNU6-965P-201ENST00000516721 96 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 RNA5SP102-201ENST00000516865 106 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 FO082796.1-201ENST00000523795 183 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 ZNF209P-201ENST00000593450 2304 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 AL109918.3-201ENST00000603072 338 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 AC097065.2-201ENST00000608159 533 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 AC068792.1-201ENST00000621354 417 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 AL136221.1-201ENST00000621449 509 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 MTND5P10-201ENST00000603719 1809 ntBASIC1.89□□□□□ -2.11
NPC1L1Q9UHC9 RNU4-15P-201ENST00000362613 141 ntBASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 SNORD115-3-201ENST00000363100 82 ntBASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 SNORA26.3-201ENST00000391119 136 ntBASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 RNA5SP212-201ENST00000391223 107 ntBASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 AL158823.1-201ENST00000418441 478 ntBASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 MTND3P21-201ENST00000433774 331 ntBASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 U8.21-201ENST00000459536 136 ntBASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 AC087884.1-201ENST00000469738 328 ntBASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 RNA5SP61-201ENST00000516453 100 ntBASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 RNU6-1069P-201ENST00000516612 133 ntBASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 AL162413.1-201ENST00000603198 110 ntBASIC1.88□□□□□ -2.11
NPC1L1Q9UHC9 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 Y_RNA.99-201ENST00000363138 105 ntBASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 EIF4E2P1-201ENST00000393781 255 ntBASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 MTCYBP2-201ENST00000407745 171 ntBASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 RNA5SP450-201ENST00000411206 102 ntBASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 RNU6-1208P-201ENST00000459588 107 ntBASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 AC008628.2-201ENST00000502605 298 ntBASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 AC009646.1-201ENST00000510455 318 ntBASIC1.87□□□□□ -2.11
NPC1L1Q9UHC9 SNORA19.2-201ENST00000516013 114 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms