Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 Y_RNA.182-201ENST00000363880 111 ntBASIC3.99□□□□□ -1.77
CNTN3Q9P232 RNU6-1027P-201ENST00000383998 107 ntBASIC3.99□□□□□ -1.77
CNTN3Q9P232 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.99□□□□□ -1.77
CNTN3Q9P232 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CNTN3Q9P232 RNU6-710P-201ENST00000410424 105 ntBASIC3.99□□□□□ -1.77
CNTN3Q9P232 AC091179.1-201ENST00000461606 579 ntBASIC3.99□□□□□ -1.77
CNTN3Q9P232 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.99□□□□□ -1.77
CNTN3Q9P232 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.99□□□□□ -1.77
CNTN3Q9P232 AC104619.4-201ENST00000510773 249 ntBASIC3.99□□□□□ -1.77
CNTN3Q9P232 RN7SKP18-201ENST00000516005 275 ntBASIC3.99□□□□□ -1.77
CNTN3Q9P232 SNORD59.2-201ENST00000516873 68 ntBASIC3.99□□□□□ -1.77
CNTN3Q9P232 AC074050.1-201ENST00000563247 211 ntBASIC3.99□□□□□ -1.77
CNTN3Q9P232 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNTN3Q9P232 AC068205.3-201ENST00000636385 468 ntBASIC3.99□□□□□ -1.77
CNTN3Q9P232 U6.98-201ENST00000637157 84 ntBASIC3.99□□□□□ -1.77
CNTN3Q9P232 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CNTN3Q9P232 AC009093.8-201ENST00000641769 292 ntBASIC3.99□□□□□ -1.77
CNTN3Q9P232 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.99□□□□□ -1.77
CNTN3Q9P232 AC010680.1-201ENST00000590024 3590 ntBASIC3.99□□□□□ -1.77
CNTN3Q9P232 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNTN3Q9P232 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CNTN3Q9P232 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CNTN3Q9P232 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.98□□□□□ -1.77
CNTN3Q9P232 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CNTN3Q9P232 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CNTN3Q9P232 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.98□□□□□ -1.77
CNTN3Q9P232 RNU6-454P-201ENST00000364292 107 ntBASIC3.98□□□□□ -1.77
CNTN3Q9P232 Y_RNA.412-201ENST00000384001 104 ntBASIC3.98□□□□□ -1.77
CNTN3Q9P232 RNU6-959P-201ENST00000384671 107 ntBASIC3.98□□□□□ -1.77
CNTN3Q9P232 Y_RNA.568-201ENST00000384742 113 ntBASIC3.98□□□□□ -1.77
CNTN3Q9P232 RNU6-763P-201ENST00000390865 106 ntBASIC3.98□□□□□ -1.77
CNTN3Q9P232 RNU2-51P-201ENST00000410708 197 ntBASIC3.98□□□□□ -1.77
CNTN3Q9P232 AL159169.1-201ENST00000421119 127 ntBASIC3.98□□□□□ -1.77
CNTN3Q9P232 AIMP1P2-201ENST00000425294 312 ntBASIC3.98□□□□□ -1.77
CNTN3Q9P232 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
CNTN3Q9P232 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.98□□□□□ -1.77
CNTN3Q9P232 RPL31P41-201ENST00000477967 372 ntBASIC3.98□□□□□ -1.77
CNTN3Q9P232 AC106707.2-201ENST00000484182 374 ntBASIC3.98□□□□□ -1.77
CNTN3Q9P232 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.98□□□□□ -1.77
CNTN3Q9P232 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.98□□□□□ -1.77
CNTN3Q9P232 AC244205.2-202ENST00000635781 342 ntBASIC3.98□□□□□ -1.77
CNTN3Q9P232 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNTN3Q9P232 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
CNTN3Q9P232 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNTN3Q9P232 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CNTN3Q9P232 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CNTN3Q9P232 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CNTN3Q9P232 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CNTN3Q9P232 AC010889.1-201ENST00000566193 2666 ntBASIC3.97□□□□□ -1.77
CNTN3Q9P232 RNA5SP119-201ENST00000362715 117 ntBASIC3.97□□□□□ -1.77
CNTN3Q9P232 MIR147B-201ENST00000390185 80 ntBASIC3.97□□□□□ -1.77
CNTN3Q9P232 AL133475.1-201ENST00000404414 305 ntBASIC3.97□□□□□ -1.77
CNTN3Q9P232 AL162725.1-201ENST00000435405 301 ntBASIC3.97□□□□□ -1.77
CNTN3Q9P232 AC004386.2-201ENST00000441858 148 ntBASIC3.97□□□□□ -1.77
CNTN3Q9P232 AL358232.1-201ENST00000448030 501 ntBASIC3.97□□□□□ -1.77
CNTN3Q9P232 RPS3P1-201ENST00000456781 192 ntBASIC3.97□□□□□ -1.77
CNTN3Q9P232 RNU6-479P-201ENST00000516348 105 ntBASIC3.97□□□□□ -1.77
CNTN3Q9P232 SNORA31.21-201ENST00000517180 77 ntBASIC3.97□□□□□ -1.77
CNTN3Q9P232 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC3.97□□□□□ -1.77
CNTN3Q9P232 AC100767.1-201ENST00000528178 123 ntBASIC3.97□□□□□ -1.77
CNTN3Q9P232 AC008011.1-201ENST00000545989 227 ntBASIC3.97□□□□□ -1.77
CNTN3Q9P232 MIR3684-201ENST00000579779 74 ntBASIC3.97□□□□□ -1.77
CNTN3Q9P232 AC008739.3-201ENST00000603262 127 ntBASIC3.97□□□□□ -1.77
CNTN3Q9P232 AC091895.1-201ENST00000624494 256 ntBASIC3.97□□□□□ -1.77
CNTN3Q9P232 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
CNTN3Q9P232 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CNTN3Q9P232 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CNTN3Q9P232 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CNTN3Q9P232 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CNTN3Q9P232 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.97□□□□□ -1.77
CNTN3Q9P232 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
CNTN3Q9P232 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
CNTN3Q9P232 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CNTN3Q9P232 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNTN3Q9P232 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
CNTN3Q9P232 RNU4-15P-201ENST00000362613 141 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 Y_RNA.40-201ENST00000362645 93 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 RNU1-105P-201ENST00000363470 161 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 RNU6-103P-201ENST00000363686 107 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 Y_RNA.215-201ENST00000364204 112 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 RNU6-275P-201ENST00000364910 107 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 RNU6-22P-201ENST00000384355 107 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 RNA5SP252-201ENST00000391131 119 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 AL357075.1-201ENST00000404107 726 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 EBAG9P1-201ENST00000418955 543 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 AC027124.2-201ENST00000428249 105 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 TOMM22P2-201ENST00000430735 237 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 SEPT7P4-201ENST00000437076 306 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 AL031183.1-201ENST00000457667 207 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 SNORD105B-201ENST00000458770 79 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 Y_RNA.797-201ENST00000515977 94 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 RN7SKP164-201ENST00000516138 266 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 RN7SKP209-201ENST00000516888 304 ntBASIC3.96□□□□□ -1.78
CNTN3Q9P232 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.96□□□□□ -1.78
CNTN3Q9P232 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.96□□□□□ -1.78
CNTN3Q9P232 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
CNTN3Q9P232 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CNTN3Q9P232 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CNTN3Q9P232 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
CNTN3Q9P232 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms