Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AL645944.1-201ENST00000603857 493 ntBASIC4.16□□□□□ -1.74
ATG3Q9NT62 MIR7106-201ENST00000612419 65 ntBASIC4.16□□□□□ -1.74
ATG3Q9NT62 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.16□□□□□ -1.74
ATG3Q9NT62 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.16□□□□□ -1.74
ATG3Q9NT62 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATG3Q9NT62 AC008568.2-201ENST00000623862 2313 ntBASIC4.16□□□□□ -1.74
ATG3Q9NT62 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC4.16□□□□□ -1.74
ATG3Q9NT62 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ATG3Q9NT62 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ATG3Q9NT62 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ATG3Q9NT62 SNORD115-32-201ENST00000364079 82 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 RNU4-84P-201ENST00000364200 139 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 Y_RNA.331-201ENST00000365267 102 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 Y_RNA.412-201ENST00000384001 104 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 RNU6-281P-201ENST00000384212 103 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 MIR10B-201ENST00000385011 110 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 MIR329-1-201ENST00000385028 80 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 RNU6-1001P-201ENST00000411265 100 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 AC126124.2-201ENST00000413542 321 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 AC007560.1-201ENST00000426912 237 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 WARS2P1-201ENST00000429678 537 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.15□□□□□ -1.75
ATG3Q9NT62 SEPT7P4-201ENST00000437076 306 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.15□□□□□ -1.75
ATG3Q9NT62 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.15□□□□□ -1.75
ATG3Q9NT62 RPS4XP22-201ENST00000480755 780 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 RPL23AP49-201ENST00000492925 468 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 SNORA40.9-201ENST00000515895 93 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 RNU6-919P-201ENST00000516731 104 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 AL391261.3-201ENST00000557194 520 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 AC233702.2-202ENST00000562547 291 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 UBL5P4-201ENST00000562584 236 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 uc_338.1-201ENST00000612113 180 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 Y_RNA.778-201ENST00000620203 90 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 AC006001.4-201ENST00000622243 395 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
ATG3Q9NT62 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.15□□□□□ -1.75
ATG3Q9NT62 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.15□□□□□ -1.75
ATG3Q9NT62 AL391516.1-201ENST00000554380 2449 ntBASIC4.15□□□□□ -1.75
ATG3Q9NT62 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ATG3Q9NT62 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATG3Q9NT62 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
ATG3Q9NT62 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
ATG3Q9NT62 RNU6-105P-201ENST00000363909 104 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 RNU6-151P-201ENST00000364158 107 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 RNU6-1286P-201ENST00000383871 107 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
ATG3Q9NT62 RNU2-2P-201ENST00000410396 191 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 NDUFB4P7-201ENST00000423198 363 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 AC092798.1-201ENST00000458542 409 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 SCARNA15.2-201ENST00000516409 127 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG3Q9NT62 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.14□□□□□ -1.75
ATG3Q9NT62 AL133393.1-201ENST00000603277 287 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 AC006023.1-201ENST00000603944 259 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 RNU2-4P-201ENST00000606190 192 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 U2.15-201ENST00000611544 191 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 U2.16-201ENST00000613119 191 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 U2.12-201ENST00000613778 191 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 U2.9-201ENST00000615427 191 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 AC090132.2-201ENST00000615881 347 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 AC005296.1-201ENST00000616145 209 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 U2.11-201ENST00000616345 191 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 U2.2-201ENST00000616535 191 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 U2.3-201ENST00000617785 191 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 U2.19-201ENST00000618602 191 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 RNU2-1-201ENST00000618664 191 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 U2.6-201ENST00000619225 191 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 U2.5-201ENST00000619465 191 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 U2.10-201ENST00000620268 191 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 AC241585.2-209ENST00000638217 143 ntBASIC4.14□□□□□ -1.75
ATG3Q9NT62 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.14□□□□□ -1.75
ATG3Q9NT62 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
ATG3Q9NT62 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
ATG3Q9NT62 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG3Q9NT62 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG3Q9NT62 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.13□□□□□ -1.75
ATG3Q9NT62 SNORA5B-201ENST00000363786 132 ntBASIC4.13□□□□□ -1.75
ATG3Q9NT62 RNU6-741P-201ENST00000383889 107 ntBASIC4.13□□□□□ -1.75
ATG3Q9NT62 RNU6-1145P-201ENST00000384246 107 ntBASIC4.13□□□□□ -1.75
ATG3Q9NT62 AC010154.1-201ENST00000425857 269 ntBASIC4.13□□□□□ -1.75
ATG3Q9NT62 AL356867.1-201ENST00000429623 299 ntBASIC4.13□□□□□ -1.75
ATG3Q9NT62 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.13□□□□□ -1.75
ATG3Q9NT62 RNU6-572P-201ENST00000516724 80 ntBASIC4.13□□□□□ -1.75
ATG3Q9NT62 RNU6-971P-201ENST00000516920 106 ntBASIC4.13□□□□□ -1.75
ATG3Q9NT62 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.13□□□□□ -1.75
ATG3Q9NT62 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.13□□□□□ -1.75
ATG3Q9NT62 MIR5695-201ENST00000579717 85 ntBASIC4.13□□□□□ -1.75
ATG3Q9NT62 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC4.13□□□□□ -1.75
ATG3Q9NT62 AL357075.2-201ENST00000614906 189 ntBASIC4.13□□□□□ -1.75
ATG3Q9NT62 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG3Q9NT62 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
ATG3Q9NT62 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG3Q9NT62 AL365361.1-201ENST00000566942 3481 ntBASIC4.12□□□□□ -1.75
ATG3Q9NT62 Y_RNA.238-201ENST00000364441 102 ntBASIC4.12□□□□□ -1.75
ATG3Q9NT62 MIR34A-201ENST00000385130 110 ntBASIC4.12□□□□□ -1.75
ATG3Q9NT62 MIR153-2-201ENST00000385225 87 ntBASIC4.12□□□□□ -1.75
ATG3Q9NT62 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATG3Q9NT62 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms