Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC008749.1-201ENST00000597650 306 ntBASIC3.62□□□□□ -1.83
PDLIM7Q9NR12 Z83818.1-201ENST00000603584 150 ntBASIC3.62□□□□□ -1.83
PDLIM7Q9NR12 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.62□□□□□ -1.83
PDLIM7Q9NR12 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDLIM7Q9NR12 AC103988.1-201ENST00000566382 2177 ntBASIC3.62□□□□□ -1.83
PDLIM7Q9NR12 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
PDLIM7Q9NR12 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PDLIM7Q9NR12 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 RNA5SP139-201ENST00000364340 117 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 RNU6-47P-201ENST00000383866 107 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 Y_RNA.418-201ENST00000384029 102 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 AL138878.1-201ENST00000405131 347 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 Y_RNA.590-201ENST00000410140 107 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 RN7SKP61-201ENST00000410642 295 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 AL358075.3-201ENST00000426289 226 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 RPL26P9-201ENST00000457466 433 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 COX6CP14-201ENST00000469580 174 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 AC074198.2-201ENST00000508153 258 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 SNORA40.9-201ENST00000515895 93 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 Y_RNA.679-201ENST00000516416 91 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 Y_RNA.683-201ENST00000516508 93 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 RNU6-1212P-201ENST00000517023 104 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 AC009163.5-201ENST00000575421 637 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 AL359198.2-201ENST00000611836 194 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 IGHVIII-44-202ENST00000636235 289 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
PDLIM7Q9NR12 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 RNU6-1159P-201ENST00000362933 107 ntBASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 SNORD115-8-201ENST00000363856 82 ntBASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 Y_RNA.275-201ENST00000364726 110 ntBASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 SNORD115-38-201ENST00000365037 82 ntBASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 RNU6-1175P-201ENST00000365200 107 ntBASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 Y_RNA.446-201ENST00000384178 104 ntBASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 RNU6-514P-201ENST00000384208 107 ntBASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 RNU2-61P-201ENST00000411069 191 ntBASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 AP000705.1-201ENST00000454567 350 ntBASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 AL031183.1-201ENST00000457667 207 ntBASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 RNU7-23P-201ENST00000459465 62 ntBASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 AP001025.1-201ENST00000486139 332 ntBASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 RNU6-1198P-201ENST00000516904 67 ntBASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 AC022559.1-201ENST00000520905 205 ntBASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 AC110741.2-201ENST00000605278 268 ntBASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PDLIM7Q9NR12 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 MIR423-201ENST00000362201 94 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 RNU6-1020P-201ENST00000363684 107 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 RNU6-270P-201ENST00000364131 105 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 AP002088.1-201ENST00000382740 395 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 Y_RNA.506-201ENST00000384494 102 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 RNU6-125P-201ENST00000384505 107 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 RNA5SP252-201ENST00000391131 119 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 AC138623.1-201ENST00000418060 216 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 AC244670.1-201ENST00000436879 112 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 AC010095.1-201ENST00000443543 144 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 HMGN2P10-201ENST00000448085 265 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 AC012308.1-201ENST00000451232 178 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 RPL23AP3-201ENST00000453844 468 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 RPL30P12-201ENST00000474666 353 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 AC091959.1-201ENST00000495857 238 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 Y_RNA.703-201ENST00000516846 111 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 SNORA31.21-201ENST00000517180 77 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 RPL21P9-201ENST00000556149 474 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 AC021739.1-201ENST00000559631 174 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 AC011921.3-201ENST00000605540 361 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 AL357075.2-201ENST00000614906 189 ntBASIC3.59□□□□□ -1.83
PDLIM7Q9NR12 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 ADAM3A-203ENST00000461344 2157 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 MIR410-201ENST00000362222 80 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 RNU1-105P-201ENST00000363470 161 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.230-201ENST00000364348 109 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 Y_RNA.331-201ENST00000365267 102 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 MTCO2P33-201ENST00000402100 465 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 RHEBP3-201ENST00000411920 351 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 AL390729.2-201ENST00000416137 156 ntBASIC3.58□□□□□ -1.84
PDLIM7Q9NR12 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms