Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC099778.2-201ENST00000610904 211 ntBASIC3.63□□□□□ -1.83
SSU72Q9NP77 AC083809.1-201ENST00000615051 472 ntBASIC3.63□□□□□ -1.83
SSU72Q9NP77 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
SSU72Q9NP77 MIR3658-201ENST00000636291 56 ntBASIC3.63□□□□□ -1.83
SSU72Q9NP77 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSU72Q9NP77 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SSU72Q9NP77 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SSU72Q9NP77 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.62□□□□□ -1.83
SSU72Q9NP77 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SSU72Q9NP77 AC010332.2-201ENST00000613083 1904 ntBASIC3.62□□□□□ -1.83
SSU72Q9NP77 AC010889.1-201ENST00000566193 2666 ntBASIC3.62□□□□□ -1.83
SSU72Q9NP77 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.62□□□□□ -1.83
SSU72Q9NP77 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SSU72Q9NP77 Y_RNA.261-201ENST00000364631 102 ntBASIC3.62□□□□□ -1.83
SSU72Q9NP77 Y_RNA.310-201ENST00000365063 113 ntBASIC3.62□□□□□ -1.83
SSU72Q9NP77 Y_RNA.368-201ENST00000365547 113 ntBASIC3.62□□□□□ -1.83
SSU72Q9NP77 RNA5SP239-201ENST00000410218 129 ntBASIC3.62□□□□□ -1.83
SSU72Q9NP77 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.62□□□□□ -1.83
SSU72Q9NP77 AC145146.1-201ENST00000496370 254 ntBASIC3.62□□□□□ -1.83
SSU72Q9NP77 RNU1-117P-201ENST00000517041 158 ntBASIC3.62□□□□□ -1.83
SSU72Q9NP77 AC026333.2-201ENST00000542164 106 ntBASIC3.62□□□□□ -1.83
SSU72Q9NP77 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.62□□□□□ -1.83
SSU72Q9NP77 MIR5006-201ENST00000583027 110 ntBASIC3.62□□□□□ -1.83
SSU72Q9NP77 AC012493.2-201ENST00000595083 291 ntBASIC3.62□□□□□ -1.83
SSU72Q9NP77 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.62□□□□□ -1.83
SSU72Q9NP77 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.62□□□□□ -1.83
SSU72Q9NP77 U6.115-201ENST00000636045 103 ntBASIC3.62□□□□□ -1.83
SSU72Q9NP77 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
SSU72Q9NP77 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSU72Q9NP77 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SSU72Q9NP77 U3.9-201ENST00000363823 204 ntBASIC3.61□□□□□ -1.83
SSU72Q9NP77 Y_RNA.218-201ENST00000364218 104 ntBASIC3.61□□□□□ -1.83
SSU72Q9NP77 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SSU72Q9NP77 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.61□□□□□ -1.83
SSU72Q9NP77 AL356095.1-201ENST00000417217 199 ntBASIC3.61□□□□□ -1.83
SSU72Q9NP77 MTND4LP9-201ENST00000427694 174 ntBASIC3.61□□□□□ -1.83
SSU72Q9NP77 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.61□□□□□ -1.83
SSU72Q9NP77 RNU2-44P-201ENST00000516795 194 ntBASIC3.61□□□□□ -1.83
SSU72Q9NP77 SCARNA14-201ENST00000516903 136 ntBASIC3.61□□□□□ -1.83
SSU72Q9NP77 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.61□□□□□ -1.83
SSU72Q9NP77 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.61□□□□□ -1.83
SSU72Q9NP77 MIR6076-201ENST00000617521 113 ntBASIC3.61□□□□□ -1.83
SSU72Q9NP77 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.61□□□□□ -1.83
SSU72Q9NP77 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSU72Q9NP77 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.61□□□□□ -1.83
SSU72Q9NP77 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.61□□□□□ -1.83
SSU72Q9NP77 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SSU72Q9NP77 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SSU72Q9NP77 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
SSU72Q9NP77 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.61□□□□□ -1.83
SSU72Q9NP77 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.61□□□□□ -1.83
SSU72Q9NP77 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SSU72Q9NP77 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSU72Q9NP77 AC010680.1-201ENST00000590024 3590 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 MFSD8-233ENST00000641482 4860 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SSU72Q9NP77 Y_RNA.24-201ENST00000362508 103 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 SNORD114-19-201ENST00000363072 75 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 RNU6-103P-201ENST00000363686 107 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 RNA5SP205-201ENST00000364653 136 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 Y_RNA.287-201ENST00000364853 94 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SSU72Q9NP77 AL355497.1-201ENST00000406262 551 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 AL357552.1-201ENST00000445254 415 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 RPS3P1-201ENST00000456781 192 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 AC091179.1-201ENST00000461606 579 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 RN7SL594P-201ENST00000470590 287 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 RPL32P34-201ENST00000486380 400 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.6□□□□□ -1.83
SSU72Q9NP77 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.6□□□□□ -1.83
SSU72Q9NP77 AP000867.2-201ENST00000532468 320 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.6□□□□□ -1.83
SSU72Q9NP77 Mico1.1-201ENST00000611698 204 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 AP000346.3-201ENST00000622821 210 ntBASIC3.6□□□□□ -1.83
SSU72Q9NP77 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SSU72Q9NP77 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SSU72Q9NP77 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.59□□□□□ -1.83
SSU72Q9NP77 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SSU72Q9NP77 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SSU72Q9NP77 RNU6-899P-201ENST00000363947 107 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 RNU4-11P-201ENST00000365287 132 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 RNU6-805P-201ENST00000365643 106 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 RNU6-198P-201ENST00000384258 104 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 SNORA8.3-201ENST00000384679 139 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 MIR548B-201ENST00000385247 97 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 RNU6-750P-201ENST00000390946 107 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 SNORA3.3-201ENST00000408712 125 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 RNA5SP293-201ENST00000410527 113 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 RNU2-37P-201ENST00000410695 177 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 Y_RNA.629-201ENST00000411368 105 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.59□□□□□ -1.83
SSU72Q9NP77 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.59□□□□□ -1.83
SSU72Q9NP77 RNU7-23P-201ENST00000459465 62 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 AC109810.1-201ENST00000534066 224 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 AL391813.1-201ENST00000603098 260 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 RNU1-30P-201ENST00000606575 163 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 AC012640.5-201ENST00000623897 319 ntBASIC3.59□□□□□ -1.83
SSU72Q9NP77 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SSU72Q9NP77 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SSU72Q9NP77 AC007496.3-201ENST00000624987 3443 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms