Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 MTCO2P3-201ENST00000442543 421 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 MTND1P29-201ENST00000448112 647 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 snoU13.9-201ENST00000458927 103 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 RNU6-261P-201ENST00000459506 102 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 AC097473.1-201ENST00000508142 408 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 ATP5EP1-201ENST00000510257 156 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 RNU6-189P-201ENST00000516120 101 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 RNU6-835P-201ENST00000516974 104 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 SUMO2P18-201ENST00000518873 252 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 SUB1P4-201ENST00000566062 339 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 AC064836.2-201ENST00000609491 462 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 PCGEM1.1-201ENST00000613431 131 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 AC103705.1-201ENST00000619013 241 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 AL158209.2-201ENST00000619266 216 ntBASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.58□□□□□ -2.16
POLR1EQ9GZS1 Y_RNA.67-201ENST00000362870 100 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 RNU6-414P-201ENST00000363705 104 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 RNU4-66P-201ENST00000365199 138 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 MIR517C-201ENST00000385103 95 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 SNORD37.1-201ENST00000390968 65 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 CALM2P3-201ENST00000400429 449 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 AP000275.1-201ENST00000411943 390 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 RPL21P111-201ENST00000418453 477 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 AMD1P1-201ENST00000457220 922 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 AC008628.2-201ENST00000502605 298 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 AC108210.2-201ENST00000503681 201 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 RNU5F-4P-201ENST00000516581 114 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 RNU6-1069P-201ENST00000516612 133 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 RNU6-567P-201ENST00000516746 107 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 SNORD53B-201ENST00000577887 78 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 AC092747.3-201ENST00000603769 301 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 Z98751.3-201ENST00000604447 521 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 AL121757.2-201ENST00000611223 313 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 uc_338.5-201ENST00000611839 155 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 MIR6715A-201ENST00000615929 79 ntBASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.57□□□□□ -2.16
POLR1EQ9GZS1 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 Y_RNA.167-201ENST00000363735 109 ntBASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 RNU6-1322P-201ENST00000364309 107 ntBASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 RNA5SP363-201ENST00000365072 115 ntBASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 SNORA32.2-201ENST00000384049 122 ntBASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 SNORA67.5-201ENST00000391036 107 ntBASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 MTCO3P40-201ENST00000392516 676 ntBASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 RNU2-41P-201ENST00000410991 178 ntBASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 SRRM1P2-201ENST00000464531 1192 ntBASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 AC005908.1-201ENST00000468701 347 ntBASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 HMGB1P33-201ENST00000563485 527 ntBASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 AC124864.2-201ENST00000624736 186 ntBASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 OR5AK4P-201ENST00000635912 903 ntBASIC1.56□□□□□ -2.16
POLR1EQ9GZS1 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 MIR340-201ENST00000362125 95 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 RNU1-17P-201ENST00000363022 152 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 RNU6-82P-201ENST00000363970 107 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 RNU6-1042P-201ENST00000384204 107 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 RNU6-1026P-201ENST00000384465 108 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 RNU6-780P-201ENST00000391030 104 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 SNORA12.2-201ENST00000391040 156 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 MIR1267-201ENST00000408723 78 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 RNU6-648P-201ENST00000410190 107 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 AL513185.2-201ENST00000425543 193 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 MTND2P22-201ENST00000444325 1033 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 MTND3P16-201ENST00000452205 344 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 RNU7-14P-201ENST00000459331 62 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 RPS29P27-201ENST00000463711 170 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 AC087477.1-201ENST00000465747 340 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 RNU6-323P-201ENST00000521915 107 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 AC104576.1-201ENST00000524225 88 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 AC025423.5-201ENST00000550230 219 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 AC015712.3-201ENST00000559380 164 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 MIR5692C1-201ENST00000585309 91 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 AC104984.5-201ENST00000586878 94 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 NBR2-204ENST00000587322 63 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 AC092807.2-201ENST00000609367 243 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
POLR1EQ9GZS1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.54□□□□□ -2.16
POLR1EQ9GZS1 RNU6-1106P-201ENST00000390845 107 ntBASIC1.54□□□□□ -2.16
POLR1EQ9GZS1 SNORA67.6-201ENST00000391093 99 ntBASIC1.54□□□□□ -2.16
POLR1EQ9GZS1 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
POLR1EQ9GZS1 EBAG9P1-201ENST00000418955 543 ntBASIC1.54□□□□□ -2.16
POLR1EQ9GZS1 MTCO3P46-201ENST00000425787 232 ntBASIC1.54□□□□□ -2.16
POLR1EQ9GZS1 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.54□□□□□ -2.16
POLR1EQ9GZS1 AL357134.1-201ENST00000445848 426 ntBASIC1.54□□□□□ -2.16
POLR1EQ9GZS1 RNU6-1037P-201ENST00000459571 107 ntBASIC1.54□□□□□ -2.16
POLR1EQ9GZS1 AC007547.1-201ENST00000462177 490 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms