Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC005520.5-201ENST00000613926 164 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 AC008147.4-201ENST00000617570 1204 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 AC099654.5-201ENST00000636479 350 ntBASIC0.79□□□□□ -2.28
UPK3BQ9BT76 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
UPK3BQ9BT76 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
UPK3BQ9BT76 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
UPK3BQ9BT76 SNORA25.9-201ENST00000365087 128 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 RNU6-108P-201ENST00000365558 107 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AL117342.1-201ENST00000404861 406 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 RNU6-195P-201ENST00000411352 109 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 SNRPEP10-201ENST00000420249 274 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AL591704.2-201ENST00000421658 181 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AC011233.1-201ENST00000422812 283 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AC012306.1-201ENST00000423267 114 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.78□□□□□ -2.28
UPK3BQ9BT76 USP9YP28-201ENST00000435142 589 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AC073910.1-201ENST00000445047 438 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 PGBD4P5-201ENST00000445958 426 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AL133217.1-201ENST00000450980 425 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 RPS29P15-201ENST00000458329 171 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 MTCO2P6-201ENST00000463134 685 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.78□□□□□ -2.28
UPK3BQ9BT76 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.78□□□□□ -2.28
UPK3BQ9BT76 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.78□□□□□ -2.28
UPK3BQ9BT76 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AC067942.3-201ENST00000512025 362 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 SNORD27.1-201ENST00000516319 72 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 RNA5SP384-201ENST00000516615 116 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 RNU6-856P-201ENST00000516959 98 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AC069113.1-201ENST00000517763 267 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.78□□□□□ -2.28
UPK3BQ9BT76 MIR3941-201ENST00000582572 103 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 MIR548AB-201ENST00000584917 84 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AP001836.1-201ENST00000604675 523 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AC009994.1-201ENST00000606889 253 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AC126177.8-201ENST00000618339 1015 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 AL450472.1-202ENST00000637286 180 ntBASIC0.78□□□□□ -2.28
UPK3BQ9BT76 RNU6-545P-201ENST00000362681 104 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 RNU1-22P-201ENST00000363334 158 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 Y_RNA.238-201ENST00000364441 102 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 RNU6-418P-201ENST00000384035 107 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 MIR194-1-201ENST00000384892 85 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 MIR499A-201ENST00000384903 122 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 MIR1-2-201ENST00000384961 85 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 RNU6-1093P-201ENST00000391194 107 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 MIR300-201ENST00000401138 83 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 MIR1276-201ENST00000408707 83 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AC060773.1-201ENST00000421698 310 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.77□□□□□ -2.29
UPK3BQ9BT76 DYNLT3P2-201ENST00000442517 295 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 RPS29P28-201ENST00000446439 141 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AC087343.1-201ENST00000477341 475 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AL133373.1-201ENST00000497098 94 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AC005178.1-201ENST00000508392 440 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AC091874.1-201ENST00000511402 339 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AC011406.1-201ENST00000512440 370 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.77□□□□□ -2.29
UPK3BQ9BT76 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 RNU2-69P-201ENST00000516061 100 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 SNORA25.17-201ENST00000517184 124 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AL512310.8-201ENST00000550183 120 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.77□□□□□ -2.29
UPK3BQ9BT76 MIR4709-201ENST00000577272 72 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 MIR4295-201ENST00000585286 85 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 HSPE1P19-201ENST00000603327 295 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 MZT1P2-201ENST00000604387 248 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AC092354.1-201ENST00000606057 376 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AC002044.1-201ENST00000606707 158 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AC022960.3-201ENST00000619794 441 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.77□□□□□ -2.29
UPK3BQ9BT76 AC009033.1-201ENST00000624279 431 ntBASIC0.77□□□□□ -2.29
UPK3BQ9BT76 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.77□□□□□ -2.29
UPK3BQ9BT76 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
UPK3BQ9BT76 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.76□□□□□ -2.29
UPK3BQ9BT76 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
UPK3BQ9BT76 RNU6-562P-201ENST00000362731 107 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 RNU4-48P-201ENST00000365559 182 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 SNORA70.7-201ENST00000384159 133 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 SNORA36A-201ENST00000384221 132 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 Y_RNA.560-201ENST00000384689 102 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 AC090960.1-201ENST00000421072 306 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 AC009961.2-201ENST00000435771 251 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.76□□□□□ -2.29
UPK3BQ9BT76 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.76□□□□□ -2.29
UPK3BQ9BT76 AC244505.5-201ENST00000443639 207 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 AL033528.1-201ENST00000453780 140 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 AC022364.2-201ENST00000457963 554 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC0.76□□□□□ -2.29
UPK3BQ9BT76 AC091435.1-201ENST00000505442 584 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 ARL2BPP4-201ENST00000506854 471 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 RNU2-34P-201ENST00000516534 121 ntBASIC0.76□□□□□ -2.29
UPK3BQ9BT76 RNA5SP102-201ENST00000516865 106 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms