Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 PPP1R2P5-201ENST00000457256 603 ntBASIC1.93□□□□□ -2.1
RPGRIP1Q96KN7 snoU13.18-201ENST00000459483 104 ntBASIC1.93□□□□□ -2.1
RPGRIP1Q96KN7 RNU6-314P-201ENST00000516574 104 ntBASIC1.93□□□□□ -2.1
RPGRIP1Q96KN7 SNORD60.2-201ENST00000516883 86 ntBASIC1.93□□□□□ -2.1
RPGRIP1Q96KN7 RNU6-250P-201ENST00000516958 103 ntBASIC1.93□□□□□ -2.1
RPGRIP1Q96KN7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.93□□□□□ -2.1
RPGRIP1Q96KN7 AC104576.1-201ENST00000524225 88 ntBASIC1.93□□□□□ -2.1
RPGRIP1Q96KN7 TRAV32-201ENST00000553993 340 ntBASIC1.93□□□□□ -2.1
RPGRIP1Q96KN7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.93□□□□□ -2.1
RPGRIP1Q96KN7 MIR4299-201ENST00000577899 72 ntBASIC1.93□□□□□ -2.1
RPGRIP1Q96KN7 RNU6-89P-201ENST00000606519 100 ntBASIC1.93□□□□□ -2.1
RPGRIP1Q96KN7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
RPGRIP1Q96KN7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.93□□□□□ -2.1
RPGRIP1Q96KN7 MIR1248-201ENST00000629190 106 ntBASIC1.93□□□□□ -2.1
RPGRIP1Q96KN7 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 AC092268.1-201ENST00000342691 405 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 SNORD32B-201ENST00000364460 84 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 Y_RNA.504-201ENST00000384481 104 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 SNORA26.3-201ENST00000391119 136 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 AL590002.1-201ENST00000406554 418 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 AC016632.1-201ENST00000503994 196 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 AC087441.2-201ENST00000529141 262 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 AC010525.2-201ENST00000590920 195 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 AC243960.4-201ENST00000600532 288 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 AC078795.3-201ENST00000602913 472 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 AL078605.1-201ENST00000603529 500 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 AC005034.5-201ENST00000604219 466 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 SNORA43.4-201ENST00000629559 138 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 AL450472.1-202ENST00000637286 180 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 WWP1P1-201ENST00000466609 2769 ntBASIC1.92□□□□□ -2.1
RPGRIP1Q96KN7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 RNU6-1329P-201ENST00000365664 107 ntBASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 SNORA67.5-201ENST00000391036 107 ntBASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 BTF3L4P2-201ENST00000392798 346 ntBASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 EIF4E2P1-201ENST00000393781 255 ntBASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 MTND3P21-201ENST00000433774 331 ntBASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 ERLEC1P1-201ENST00000433806 578 ntBASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 RNU6-1037P-201ENST00000459571 107 ntBASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 AC083904.1-201ENST00000487828 231 ntBASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 PTP4A1P4-201ENST00000512479 322 ntBASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 MIR449C-201ENST00000516047 92 ntBASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 RNA5SP490-201ENST00000517141 136 ntBASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 BNIP3P25-201ENST00000596023 559 ntBASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 DISC2.1-201ENST00000612827 205 ntBASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 AL359314.1-201ENST00000616913 261 ntBASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
RPGRIP1Q96KN7 AC121333.1-201ENST00000567488 2709 ntBASIC1.9□□□□□ -2.1
RPGRIP1Q96KN7 MTND4P23-201ENST00000447723 1363 ntBASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 Y_RNA.38-201ENST00000362617 102 ntBASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 SNORA36A-201ENST00000384221 132 ntBASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 MIR29C-201ENST00000385231 88 ntBASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 MTCYBP2-201ENST00000407745 171 ntBASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 MIR1294-201ENST00000408503 142 ntBASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 SRIP3-201ENST00000413200 219 ntBASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 AL158823.1-201ENST00000418441 478 ntBASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 AL359672.1-201ENST00000442302 409 ntBASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 RPS29P11-201ENST00000496507 171 ntBASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 RNU6-612P-201ENST00000516909 102 ntBASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 AC004492.1-201ENST00000607036 742 ntBASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 AL512598.1-201ENST00000610158 273 ntBASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 FAM157A-202ENST00000615155 405 ntBASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 FER-210ENST00000628534 558 ntTSL 5 BASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 MIR1321-201ENST00000637766 79 ntBASIC1.9□□□□□ -2.11
RPGRIP1Q96KN7 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 RNU6-451P-201ENST00000362921 107 ntBASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 RNU6-1090P-201ENST00000364065 94 ntBASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 RNU4-56P-201ENST00000364700 142 ntBASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 SNORD14D-201ENST00000384390 87 ntBASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 RNA5SP201-201ENST00000410316 124 ntBASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 MRPS10P2-201ENST00000431226 381 ntBASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 RPL23AP6-201ENST00000446637 472 ntBASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 AC245102.2-201ENST00000448956 180 ntBASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 RNU7-95P-201ENST00000459222 64 ntBASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 AC008628.2-201ENST00000502605 298 ntBASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 AC093259.1-201ENST00000509755 300 ntBASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 AC092436.3-201ENST00000511788 257 ntBASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 AL157687.1-201ENST00000554853 619 ntBASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.89□□□□□ -2.11
RPGRIP1Q96KN7 MIR3923-201ENST00000579521 83 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms