Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RNU6-567P-201ENST00000516746 107 ntBASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 SUMO2P18-201ENST00000518873 252 ntBASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 MIR3913-1-201ENST00000577744 102 ntBASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 AL157834.3-201ENST00000615543 103 ntBASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.26□□□□□ -2.21
ECHDC3Q96DC8 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 MIR337-201ENST00000362281 93 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 Y_RNA.159-201ENST00000363674 87 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 RNU6-392P-201ENST00000364926 101 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 RNU6-438P-201ENST00000365561 103 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 SNORA36A-201ENST00000384221 132 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AL161935.2-201ENST00000414627 60 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 MTND4P32-201ENST00000437189 1237 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AC007395.1-201ENST00000451333 677 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 C1DP4-201ENST00000455429 424 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 RNU7-14P-201ENST00000459331 62 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 RPL36AP21-201ENST00000490372 323 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AC099513.1-201ENST00000490423 301 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AC108078.1-201ENST00000508073 725 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 RNA5SP445-201ENST00000515889 115 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 SNORD60.2-201ENST00000516883 86 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 RNU6-902P-201ENST00000517212 91 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AC069113.1-201ENST00000517763 267 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 RRN3P3-201ENST00000549207 578 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AC073413.2-201ENST00000604332 360 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 CTHRC1P1-201ENST00000605383 469 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AC064807.4-201ENST00000607201 407 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AC109347.2-201ENST00000610220 349 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 AL136221.1-201ENST00000621449 509 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 MIR8063-201ENST00000621930 81 ntBASIC1.25□□□□□ -2.21
ECHDC3Q96DC8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 RNU6-1120P-201ENST00000362988 108 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 SNORA63D-201ENST00000364359 132 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 Y_RNA.327-201ENST00000365201 102 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 AL117342.1-201ENST00000404861 406 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 RPL21P111-201ENST00000418453 477 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 HSPE1P9-201ENST00000440046 311 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 MTCO2P3-201ENST00000442543 421 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 OFD1P4Y-201ENST00000455273 1179 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 RNU7-180P-201ENST00000459240 63 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 RPL9P9-202ENST00000466501 579 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 RPS26P55-201ENST00000471178 356 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 HMGN2P9-201ENST00000476875 229 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 AC005840.1-201ENST00000498412 377 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 RNA5SP437-201ENST00000517249 129 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 AC090115.3-201ENST00000553218 849 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 AC005609.4-201ENST00000625071 447 ntBASIC1.24□□□□□ -2.21
ECHDC3Q96DC8 SNORD1A-201ENST00000364968 72 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 RNU6-517P-201ENST00000384362 110 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 Y_RNA.504-201ENST00000384481 104 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 MIR520A-201ENST00000384862 85 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 RNU2-9P-201ENST00000410194 145 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 MTATP6P18-201ENST00000417994 673 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 AC012306.1-201ENST00000423267 114 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 CETN4P-201ENST00000432407 469 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 AL135790.2-201ENST00000437701 267 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 ATP5J2P3-201ENST00000451550 258 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 SNRPFP3-201ENST00000457792 225 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 RNU5F-4P-201ENST00000516581 114 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 MTCO2P4-201ENST00000517968 247 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 SUB1P2-201ENST00000556401 297 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 MIR5583-1-201ENST00000580941 59 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 MTATP6P3-201ENST00000581686 676 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 AC069114.2-201ENST00000604699 304 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 AL121890.5-201ENST00000620848 304 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 AL159152.1-201ENST00000635019 2587 ntBASIC1.23□□□□□ -2.21
ECHDC3Q96DC8 AC010615.1-201ENST00000594254 1764 ntBASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 Y_RNA.201-201ENST00000364052 96 ntBASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 Y_RNA.255-201ENST00000364581 97 ntBASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 RNU6-939P-201ENST00000384634 107 ntBASIC1.22□□□□□ -2.21
ECHDC3Q96DC8 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms