Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HPS3Q969F9 AC006157.1-201ENST00000611750 366 ntBASIC3.03□□□□□ -1.92
HPS3Q969F9 AC083806.3-201ENST00000614016 455 ntBASIC3.03□□□□□ -1.92
HPS3Q969F9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.03□□□□□ -1.92
HPS3Q969F9 AL449363.1-201ENST00000617815 186 ntBASIC3.03□□□□□ -1.92
HPS3Q969F9 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3.03□□□□□ -1.92
HPS3Q969F9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HPS3Q969F9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HPS3Q969F9 Y_RNA.39-201ENST00000362620 98 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 RNU6-137P-201ENST00000363680 108 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 U3.9-201ENST00000363823 204 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 RNA5SP240-201ENST00000365355 128 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 Y_RNA.364-201ENST00000365532 101 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 SNORA69.1-201ENST00000390904 137 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 EEF1B2P7-201ENST00000451177 676 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 GSTA11P-201ENST00000452866 669 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 AL163540.1-201ENST00000485382 386 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 RNA5SP54-201ENST00000516951 92 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 RN7SKP295-201ENST00000517264 153 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 RNU6-586P-201ENST00000517265 104 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 EIF4A1P12-201ENST00000551910 141 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 MIR4672-201ENST00000583126 81 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 AC092447.9-201ENST00000603395 144 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 PCGEM1.1-201ENST00000613431 131 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 AL138825.1-201ENST00000618587 192 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 MIR6733-201ENST00000635723 61 ntBASIC3.02□□□□□ -1.93
HPS3Q969F9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.02□□□□□ -1.93
HPS3Q969F9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.02□□□□□ -1.93
HPS3Q969F9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.01□□□□□ -1.93
HPS3Q969F9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.01□□□□□ -1.93
HPS3Q969F9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HPS3Q969F9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.01□□□□□ -1.93
HPS3Q969F9 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.01□□□□□ -1.93
HPS3Q969F9 Y_RNA.31-201ENST00000362574 102 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 RNU6-1180P-201ENST00000364935 107 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 Y_RNA.319-201ENST00000365138 92 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 SET-203ENST00000372688 801 ntTSL 2 BASIC3.01□□□□□ -1.93
HPS3Q969F9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HPS3Q969F9 RNU6-308P-201ENST00000390957 107 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 AL590004.1-201ENST00000405321 300 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 MIR320B2-201ENST00000408479 138 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 RNA5SP201-201ENST00000410316 124 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 RNU2-63P-201ENST00000410792 194 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.01□□□□□ -1.93
HPS3Q969F9 PMCHL1-202ENST00000423102 261 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 AC087499.2-201ENST00000432861 149 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 AP000705.1-201ENST00000454567 350 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.01□□□□□ -1.93
HPS3Q969F9 Y_RNA.711-201ENST00000516993 102 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 ELOCP31-201ENST00000540463 467 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 MIR3605-201ENST00000583214 100 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.01□□□□□ -1.93
HPS3Q969F9 AL713866.2-201ENST00000603579 219 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 AL353621.2-201ENST00000605340 133 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 AC116312.1-201ENST00000606841 314 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 AC091925.1-201ENST00000623204 462 ntBASIC3.01□□□□□ -1.93
HPS3Q969F9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3□□□□□ -1.93
HPS3Q969F9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3□□□□□ -1.93
HPS3Q969F9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HPS3Q969F9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
HPS3Q969F9 MIR26A1-201ENST00000362205 77 ntBASIC3□□□□□ -1.93
HPS3Q969F9 Y_RNA.106-201ENST00000363189 100 ntBASIC3□□□□□ -1.93
HPS3Q969F9 U8.10-201ENST00000384260 133 ntBASIC3□□□□□ -1.93
HPS3Q969F9 RNU6-378P-201ENST00000384324 107 ntBASIC3□□□□□ -1.93
HPS3Q969F9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3□□□□□ -1.93
HPS3Q969F9 MCFD2P1-201ENST00000417812 300 ntBASIC3□□□□□ -1.93
HPS3Q969F9 USP9YP16-201ENST00000430287 407 ntBASIC3□□□□□ -1.93
HPS3Q969F9 AL445687.1-201ENST00000439946 251 ntBASIC3□□□□□ -1.93
HPS3Q969F9 RPL39P40-201ENST00000445481 146 ntBASIC3□□□□□ -1.93
HPS3Q969F9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3□□□□□ -1.93
HPS3Q969F9 USP9YP23-201ENST00000455085 407 ntBASIC3□□□□□ -1.93
HPS3Q969F9 RN7SL429P-201ENST00000479090 223 ntBASIC3□□□□□ -1.93
HPS3Q969F9 RN7SL489P-201ENST00000486185 223 ntBASIC3□□□□□ -1.93
HPS3Q969F9 RN7SL327P-201ENST00000488659 223 ntBASIC3□□□□□ -1.93
HPS3Q969F9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3□□□□□ -1.93
HPS3Q969F9 ANXA2P1-201ENST00000505539 926 ntBASIC3□□□□□ -1.93
HPS3Q969F9 SNORA25.10-201ENST00000515926 124 ntBASIC3□□□□□ -1.93
HPS3Q969F9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3□□□□□ -1.93
HPS3Q969F9 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3□□□□□ -1.93
HPS3Q969F9 ELOCP29-201ENST00000588193 334 ntBASIC3□□□□□ -1.93
HPS3Q969F9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC3□□□□□ -1.93
HPS3Q969F9 RN7SL853P-201ENST00000617250 223 ntBASIC3□□□□□ -1.93
HPS3Q969F9 AC243829.7-201ENST00000633081 225 ntBASIC3□□□□□ -1.93
HPS3Q969F9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3□□□□□ -1.93
HPS3Q969F9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HPS3Q969F9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.99□□□□□ -1.93
HPS3Q969F9 RNU1-72P-201ENST00000362976 153 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 RNU5F-3P-201ENST00000363767 117 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 AC117470.1-201ENST00000381974 330 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 RNU6-301P-201ENST00000384277 107 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 RNY1P14-201ENST00000384426 108 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 Y_RNA.496-201ENST00000384444 101 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 RNU6-220P-201ENST00000390919 107 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 SNORA46.1-201ENST00000391069 153 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 AC114482.1-201ENST00000418010 247 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.99□□□□□ -1.93
HPS3Q969F9 AC092427.1-202ENST00000430569 476 ntBASIC2.99□□□□□ -1.93
HPS3Q969F9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.99□□□□□ -1.93
HPS3Q969F9 AC090515.1-201ENST00000465295 476 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms