Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SNORA64-201ENST00000384674 134 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 MIR514A2-201ENST00000385131 88 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 MIR514A3-201ENST00000385132 88 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
PTP4A1Q93096 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
PTP4A1Q93096 RNU2-16P-201ENST00000410712 136 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC1.77□□□□□ -2.13
PTP4A1Q93096 RPL21P111-201ENST00000418453 477 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 HSPE1P21-201ENST00000438283 308 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 RPL36AP21-201ENST00000490372 323 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 AC096745.1-201ENST00000509945 370 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 SNORA31.17-201ENST00000516953 127 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.77□□□□□ -2.13
PTP4A1Q93096 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.77□□□□□ -2.13
PTP4A1Q93096 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.77□□□□□ -2.13
PTP4A1Q93096 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.77□□□□□ -2.13
PTP4A1Q93096 MIR4648-201ENST00000580107 72 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.77□□□□□ -2.13
PTP4A1Q93096 AL162413.1-201ENST00000603198 110 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 SNRPGP19-201ENST00000603826 189 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.77□□□□□ -2.13
PTP4A1Q93096 MIR8076-201ENST00000611401 83 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 TCL6_2.1-201ENST00000615162 119 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 AC068792.1-201ENST00000621354 417 ntBASIC1.77□□□□□ -2.13
PTP4A1Q93096 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.77□□□□□ -2.13
PTP4A1Q93096 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.76□□□□□ -2.13
PTP4A1Q93096 RNU4-20P-201ENST00000365601 151 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 RNU6-128P-201ENST00000383976 107 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 RNU2-2P-201ENST00000410396 191 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 RNU2-7P-201ENST00000410794 178 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 AL445646.1-201ENST00000431784 216 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 ERLEC1P1-201ENST00000433806 578 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 AC069257.2-201ENST00000441819 155 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 MTCO1P44-201ENST00000441935 243 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.76□□□□□ -2.13
PTP4A1Q93096 MTND1P29-201ENST00000448112 647 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 HMGN2P23-201ENST00000456759 269 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 AMD1P1-201ENST00000457220 922 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 snoU13.6-201ENST00000458785 104 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.76□□□□□ -2.13
PTP4A1Q93096 AC026371.1-201ENST00000551867 419 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.76□□□□□ -2.13
PTP4A1Q93096 SNRPGP20-201ENST00000604477 205 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 U2.15-201ENST00000611544 191 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 U2.16-201ENST00000613119 191 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 U2.12-201ENST00000613778 191 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 U2.20-201ENST00000613956 192 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 U2.9-201ENST00000615427 191 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 U2.11-201ENST00000616345 191 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 U2.2-201ENST00000616535 191 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 U2.3-201ENST00000617785 191 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 U2.19-201ENST00000618602 191 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 RNU2-1-201ENST00000618664 191 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 U2.6-201ENST00000619225 191 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 U2.5-201ENST00000619465 191 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 U2.10-201ENST00000620268 191 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 AC092881.1-201ENST00000638218 2733 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 OR4G1P-203ENST00000641984 1631 ntBASIC1.76□□□□□ -2.13
PTP4A1Q93096 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.76□□□□□ -2.13
PTP4A1Q93096 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.76□□□□□ -2.13
PTP4A1Q93096 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
PTP4A1Q93096 RNU5B-2P-201ENST00000363036 113 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 RNU6-112P-201ENST00000363599 104 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 RNA5SP126-201ENST00000365092 109 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 MIR520A-201ENST00000384862 85 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 MIR521-1-201ENST00000384902 87 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
PTP4A1Q93096 SNORA12.2-201ENST00000391040 156 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 MIR450B-201ENST00000401182 78 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 SNRPEP10-201ENST00000420249 274 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 AC010409.1-201ENST00000487382 476 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 RNU6-1332P-201ENST00000516666 104 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.75□□□□□ -2.13
PTP4A1Q93096 CBX3P4-201ENST00000538909 354 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 MIR4285-201ENST00000581001 85 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 MIR5006-201ENST00000583027 110 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.75□□□□□ -2.13
PTP4A1Q93096 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.75□□□□□ -2.13
PTP4A1Q93096 DISC2.1-201ENST00000612827 205 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.75□□□□□ -2.13
PTP4A1Q93096 AC068137.3-201ENST00000639191 341 ntBASIC1.75□□□□□ -2.13
PTP4A1Q93096 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
PTP4A1Q93096 MTND4P5-201ENST00000435821 1374 ntBASIC1.74□□□□□ -2.13
PTP4A1Q93096 MIR340-201ENST00000362125 95 ntBASIC1.74□□□□□ -2.13
PTP4A1Q93096 RNU6-877P-201ENST00000383868 107 ntBASIC1.74□□□□□ -2.13
PTP4A1Q93096 SNORA70B-201ENST00000384210 135 ntBASIC1.74□□□□□ -2.13
PTP4A1Q93096 MIR1283-1-201ENST00000408494 87 ntBASIC1.74□□□□□ -2.13
PTP4A1Q93096 RNU4-26P-201ENST00000410270 107 ntBASIC1.74□□□□□ -2.13
PTP4A1Q93096 RNU6-325P-201ENST00000411132 105 ntBASIC1.74□□□□□ -2.13
PTP4A1Q93096 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.74□□□□□ -2.13
PTP4A1Q93096 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
PTP4A1Q93096 MTND1P1-201ENST00000445453 368 ntBASIC1.74□□□□□ -2.13
PTP4A1Q93096 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.74□□□□□ -2.13
PTP4A1Q93096 snoU13.9-201ENST00000458927 103 ntBASIC1.74□□□□□ -2.13
PTP4A1Q93096 AC010531.2-201ENST00000465012 153 ntBASIC1.74□□□□□ -2.13
PTP4A1Q93096 TRBVA-201ENST00000498804 316 ntBASIC1.74□□□□□ -2.13
PTP4A1Q93096 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.74□□□□□ -2.13
PTP4A1Q93096 AC092436.3-201ENST00000511788 257 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 155.7 ms