Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 RNU6-1198P-201ENST00000516904 67 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 SNORA31.26-201ENST00000517250 137 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 AC079598.5-201ENST00000547460 117 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 AC073410.2-201ENST00000603240 332 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 AL034555.1-201ENST00000604816 211 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 AC000403.1-201ENST00000613696 3585 ntBASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
ATG4AQ8WYN0 FAM35CP-201ENST00000554755 2470 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 Y_RNA.214-201ENST00000364201 112 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 RNA5SP139-201ENST00000364340 117 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 RNU6-702P-201ENST00000364982 107 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 Y_RNA.401-201ENST00000383965 117 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 RNU6-611P-201ENST00000384276 104 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 RNU6-713P-201ENST00000384761 107 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 MIR186-201ENST00000384988 86 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 MIR487A-201ENST00000385009 80 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 MIR10B-201ENST00000385011 110 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 U3.26-201ENST00000391236 204 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 ELOCP20-201ENST00000422460 345 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 AIMP1P2-201ENST00000425294 312 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 AL358075.3-201ENST00000426289 226 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 DYNLT3P2-201ENST00000442517 295 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 AC096638.1-201ENST00000444678 216 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 AC112771.1-201ENST00000463581 102 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 RPL36AP48-201ENST00000485521 314 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 AC067942.3-201ENST00000512025 362 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 SNORA31.6-201ENST00000516241 130 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 RN7SKP282-201ENST00000516824 299 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 SNORA40.15-201ENST00000516884 107 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 RNU6-897P-201ENST00000517135 105 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 RNU6-58P-201ENST00000517143 103 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 CYP4A27P-201ENST00000567218 190 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 MYL12BP1-201ENST00000569826 507 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 AC002064.3-201ENST00000623448 346 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 AC096644.4-201ENST00000563417 2912 ntBASIC2.86□□□□□ -1.95
ATG4AQ8WYN0 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 SNORA18.3-201ENST00000384122 132 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 Y_RNA.458-201ENST00000384240 102 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 RNU1-57P-201ENST00000384491 166 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 Y_RNA.512-201ENST00000384518 102 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 Y_RNA.556-201ENST00000384677 113 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 SNORD78.2-201ENST00000391076 69 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 RNU6-159P-201ENST00000391080 106 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 RNU6-130P-201ENST00000411112 103 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 RPS15AP7-201ENST00000439294 405 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 AC083906.5-201ENST00000503722 328 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 RNU6-1143P-201ENST00000516125 104 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 RNA5SP341-201ENST00000516261 117 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 SCARNA13-201ENST00000516672 275 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 RN7SKP57-201ENST00000517248 293 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 AC005520.5-201ENST00000613926 164 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 AC010205.1-201ENST00000616668 449 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 UCA1.1-201ENST00000620952 75 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 AL359854.1-201ENST00000614203 1594 ntBASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
ATG4AQ8WYN0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 MIR26A1-201ENST00000362205 77 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 RNU6-655P-201ENST00000362858 107 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 RNU6-1210P-201ENST00000363775 107 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 RNU6-770P-201ENST00000363929 105 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 RNU6-879P-201ENST00000364328 108 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 CD24P4-201ENST00000382840 243 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 RNU6-318P-201ENST00000384283 103 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 RNU6-505P-201ENST00000384427 107 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 AL121594.1-201ENST00000475906 575 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 MRPS36P2-201ENST00000512569 299 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 RNU6-1012P-201ENST00000516606 109 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 RNA5SP54-201ENST00000516951 92 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 Y_RNA.713-201ENST00000517013 96 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 UBL5P4-201ENST00000562584 236 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 MIR3923-201ENST00000579521 83 ntBASIC2.84□□□□□ -1.95
ATG4AQ8WYN0 MIR5695-201ENST00000579717 85 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms