Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AL713866.2-201ENST00000603579 219 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 Z98751.3-201ENST00000604447 521 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 AL133255.1-201ENST00000606374 441 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 AC103810.6-201ENST00000606708 136 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 AL050343.2-201ENST00000607338 280 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 AC005520.5-201ENST00000613926 164 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 MTND4P29-201ENST00000503122 1372 ntBASIC2.35□□□□□ -2.03
SLC44A1Q8WWI5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.187-201ENST00000363918 113 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 RNU4-9P-201ENST00000364951 139 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 Y_RNA.460-201ENST00000384255 102 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 MIR29B2-201ENST00000385055 81 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 MTCO3P10-201ENST00000455912 772 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 RPL30P10-201ENST00000488148 337 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 SCARNA16.2-201ENST00000516520 172 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 MRPS36P4-201ENST00000534436 298 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 AC093249.1-201ENST00000567049 203 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 MIR5701-3-201ENST00000578890 82 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 MIR5694-201ENST00000581190 76 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 MIR5701-1-201ENST00000585138 82 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 AC005014.2-201ENST00000607795 599 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 AC084781.2-201ENST00000615568 161 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 MIR5701-2-201ENST00000615634 82 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 AC073544.1-201ENST00000600110 1595 ntBASIC2.34□□□□□ -2.03
SLC44A1Q8WWI5 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
SLC44A1Q8WWI5 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
SLC44A1Q8WWI5 MTND5P10-201ENST00000603719 1809 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 SNORD115-32-201ENST00000364079 82 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 RNU6-890P-201ENST00000384121 107 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 MIR95-201ENST00000385072 81 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 AL078595.1-201ENST00000404458 226 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 MTCYBP2-201ENST00000407745 171 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 AC012306.1-201ENST00000423267 114 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 AL353705.4-201ENST00000449661 238 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 AL353752.1-201ENST00000454946 260 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 RPL30P15-201ENST00000457129 321 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 RN7SKP210-201ENST00000459176 261 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 RPL23AP75-201ENST00000491601 451 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 AF186996.7-201ENST00000492781 209 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 AC021146.2-201ENST00000504736 556 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 HMGN1P13-201ENST00000505795 138 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 HMGB3P3-201ENST00000510526 400 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 AC109329.2-201ENST00000519658 482 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 CYP4A27P-201ENST00000567218 190 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 AL359314.1-201ENST00000616913 261 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 AL449363.1-201ENST00000617815 186 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 AC137590.2-201ENST00000619709 240 ntBASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SLC44A1Q8WWI5 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 RNU4-15P-201ENST00000362613 141 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 SNORA36A-201ENST00000384221 132 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 RNU6-301P-201ENST00000384277 107 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 RNU6-331P-201ENST00000384724 107 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 RNA5SP201-201ENST00000410316 124 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 RNU6-1304P-201ENST00000411374 106 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 AC003685.2-201ENST00000422795 395 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 RPS15AP28-201ENST00000435088 386 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 AC104435.1-201ENST00000483483 166 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 AC140059.1-201ENST00000489238 361 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 AC104581.2-201ENST00000572227 430 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 MIR3923-201ENST00000579521 83 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 CYP2C61P-201ENST00000604072 290 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 MIR6840-201ENST00000611937 71 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 MIR5739-201ENST00000619803 80 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 AL160413.1-201ENST00000622780 310 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 AC090574.1-201ENST00000623186 233 ntBASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SLC44A1Q8WWI5 AC006026.1-201ENST00000444025 1803 ntBASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 SNORA38-201ENST00000363946 132 ntBASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 RNU6-1040P-201ENST00000383974 107 ntBASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 SNORA6-201ENST00000384033 151 ntBASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 RNA5SP494-201ENST00000410653 129 ntBASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 AC018634.1-201ENST00000437554 401 ntBASIC2.31□□□□□ -2.04
SLC44A1Q8WWI5 AC087477.1-201ENST00000465747 340 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms