| CHPT1 | Q8WUD6 | SNORA75.4-201 | ENST00000391278 | 119 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | MTCYBP4-201 | ENST00000401524 | 249 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AL355497.1-201 | ENST00000406262 | 551 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | RN7SKP61-201 | ENST00000410642 | 295 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | RNU6-1304P-201 | ENST00000411374 | 106 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC083867.1-201 | ENST00000413567 | 457 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AL445259.1-203 | ENST00000427828 | 251 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | RPL39P29-201 | ENST00000447779 | 157 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AL357873.1-201 | ENST00000449215 | 282 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC022445.1-201 | ENST00000457499 | 408 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | RPL30P12-201 | ENST00000474666 | 353 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | RPL7P42-201 | ENST00000481005 | 679 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC114801.2-201 | ENST00000503825 | 781 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC004052.1-202 | ENST00000505680 | 516 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | LINC02064-201 | ENST00000506492 | 470 nt | TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | RNA5SP384-201 | ENST00000516615 | 116 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AP001825.1-201 | ENST00000534275 | 351 nt | TSL 2 BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC008083.3-202 | ENST00000552063 | 277 nt | TSL 3 BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC109446.1-201 | ENST00000566172 | 220 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | MIR3935-201 | ENST00000583472 | 104 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC009318.2-201 | ENST00000610917 | 651 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | HOXA11-AS1_4.1-201 | ENST00000620901 | 233 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | U4.3-201 | ENST00000621047 | 82 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | ABCA9-AS1-203 | ENST00000627596 | 426 nt | TSL 5 BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC002543.1-201 | ENST00000299783 | 1954 nt | BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | OR8K3-204 | ENST00000641689 | 2380 nt | APPRIS P1 BASIC | 2.06 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC006026.1-201 | ENST00000444025 | 1803 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AL359851.1-201 | ENST00000569460 | 4997 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | Y_RNA.259-201 | ENST00000364619 | 101 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | Y_RNA.646-201 | ENST00000410980 | 101 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | RNU6-1245P-201 | ENST00000411130 | 106 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | EIF4EP2-201 | ENST00000422816 | 654 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | Z82205.1-201 | ENST00000428456 | 297 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | RPL23AP7-203 | ENST00000449021 | 469 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC055764.1-201 | ENST00000454526 | 473 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | MTCO3P10-201 | ENST00000455912 | 772 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | ELOCP24-201 | ENST00000456370 | 334 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | RPS27P21-201 | ENST00000486977 | 252 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC005741.1-201 | ENST00000511094 | 432 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | RNA5SP364-201 | ENST00000516938 | 78 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC087664.2-201 | ENST00000522898 | 551 nt | TSL 4 BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC103794.1-201 | ENST00000531763 | 197 nt | TSL 3 BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC022035.1-201 | ENST00000579923 | 302 nt | TSL 2 BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | MIR4672-201 | ENST00000583126 | 81 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC011825.2-201 | ENST00000583138 | 553 nt | TSL 4 BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AL158827.2-201 | ENST00000602494 | 330 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC022202.1-201 | ENST00000613515 | 211 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AL691447.3-201 | ENST00000635020 | 330 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | CENPCP1-201 | ENST00000533085 | 2578 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | Y_RNA.123-201 | ENST00000363338 | 102 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | RNU6-1210P-201 | ENST00000363775 | 107 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | BTF3L4P2-201 | ENST00000392798 | 346 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AL356057.3-201 | ENST00000402607 | 340 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AL157709.1-201 | ENST00000412695 | 424 nt | TSL 3 BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC243428.1-201 | ENST00000421099 | 264 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AL589935.1-209 | ENST00000432050 | 418 nt | TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC108938.1-201 | ENST00000451204 | 136 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | RPS3P1-201 | ENST00000456781 | 192 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC025033.1-201 | ENST00000463883 | 194 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AL121594.1-201 | ENST00000475906 | 575 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | FO393415.2-201 | ENST00000480085 | 343 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | ACA59.1-201 | ENST00000515966 | 143 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | LINC02425-201 | ENST00000536217 | 376 nt | TSL 3 BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | MIR5696-201 | ENST00000578474 | 85 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AL031274.2-201 | ENST00000599419 | 203 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AL133255.1-201 | ENST00000606374 | 441 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AP000560.1-201 | ENST00000624150 | 1937 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | PCDH11Y-203 | ENST00000362095 | 4220 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC009541.1-201 | ENST00000438279 | 2662 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC009487.4-201 | ENST00000624969 | 3585 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | MTND4P29-201 | ENST00000503122 | 1372 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | RTL4-201 | ENST00000340433 | 2613 nt | APPRIS P1 BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | TRAJ49-201 | ENST00000390488 | 56 nt | APPRIS P1 BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | USMG5P1-201 | ENST00000425964 | 177 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | SMG7-AS1-202 | ENST00000432837 | 466 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AL592309.2-201 | ENST00000444647 | 607 nt | TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AL021397.1-201 | ENST00000451806 | 248 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | LINC01198-202 | ENST00000458282 | 558 nt | TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC107032.1-201 | ENST00000485945 | 480 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | HYDIN2-201 | ENST00000493714 | 554 nt | TSL 4 BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC097473.1-201 | ENST00000508142 | 408 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | SEMA6A-AS1-204 | ENST00000510682 | 521 nt | TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC010420.1-201 | ENST00000515077 | 509 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | RNU1-40P-201 | ENST00000516816 | 164 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | RNU1-97P-201 | ENST00000516872 | 164 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | SNORA31.25-201 | ENST00000517242 | 134 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC034114.1-201 | ENST00000520293 | 285 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AP002884.4-201 | ENST00000527589 | 594 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | HSPE1P4-201 | ENST00000550617 | 308 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | ANP32BP3-201 | ENST00000559213 | 706 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC007229.1-201 | ENST00000590455 | 412 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC005014.2-201 | ENST00000607795 | 599 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC084781.2-201 | ENST00000615568 | 161 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | MIR6817-201 | ENST00000615588 | 66 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AC023490.3-201 | ENST00000621762 | 358 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | NCBP1-205 | ENST00000629069 | 249 nt | TSL 5 BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | AP000550.4-201 | ENST00000639507 | 358 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | OR2L2-202 | ENST00000641771 | 4300 nt | APPRIS P1 BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | MIER3-204 | ENST00000381226 | 5210 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| CHPT1 | Q8WUD6 | ZNF404-202 | ENST00000587539 | 1851 nt | APPRIS P2 TSL 5 BASIC | 2.03 | □□□□□ -2.09 | | |