Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MIR3976-201ENST00000606807 139 ntBASIC0.97□□□□□ -2.25
CLHC1Q8NHS4 BX284668.6-201ENST00000606899 438 ntBASIC0.97□□□□□ -2.25
CLHC1Q8NHS4 7SK.8-201ENST00000612110 250 ntBASIC0.97□□□□□ -2.25
CLHC1Q8NHS4 7SK.11-201ENST00000615477 250 ntBASIC0.97□□□□□ -2.25
CLHC1Q8NHS4 7SK.13-201ENST00000622040 250 ntBASIC0.97□□□□□ -2.25
CLHC1Q8NHS4 MTND4P4-201ENST00000439033 1366 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 RNU6-552P-201ENST00000362869 119 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 RNU6-1097P-201ENST00000363586 107 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 RNU1-96P-201ENST00000364163 162 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 SNORA25-201ENST00000384384 134 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 RNU6-331P-201ENST00000384724 107 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 MTND3P17-201ENST00000416968 344 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 GPR143P-201ENST00000434155 205 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 AL162395.1-201ENST00000457882 422 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 AC008628.2-201ENST00000502605 298 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 AC067942.3-201ENST00000512025 362 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 MTND2P32-201ENST00000521584 1038 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 AC021231.3-201ENST00000558497 370 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 SNORA59B-202ENST00000578183 701 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 MIR3682-201ENST00000581338 84 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 AC064872.1-201ENST00000604823 1072 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 AC064807.4-201ENST00000607201 407 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 AL136221.1-201ENST00000621449 509 ntBASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CLHC1Q8NHS4 RNU5F-7P-201ENST00000363696 115 ntBASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 RPS3AP3-201ENST00000411933 242 ntBASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 SNRPEP10-201ENST00000420249 274 ntBASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 AL593851.1-201ENST00000426171 157 ntBASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 AC009961.2-201ENST00000435771 251 ntBASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 AC244505.5-201ENST00000443639 207 ntBASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 snoU13.27-201ENST00000459278 104 ntBASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 AC087343.1-201ENST00000477341 475 ntBASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 AC005178.1-201ENST00000508392 440 ntBASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 RNU2-69P-201ENST00000516061 100 ntBASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 AP001836.1-201ENST00000604675 523 ntBASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 AC027335.2-201ENST00000624030 375 ntBASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 SNORA43.4-201ENST00000629559 138 ntBASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 SEPT14P19-203ENST00000633205 211 ntBASIC0.95□□□□□ -2.26
CLHC1Q8NHS4 RNU4-38P-201ENST00000364472 129 ntBASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 RNU6-53P-201ENST00000365367 106 ntBASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 RNU6-434P-201ENST00000384376 107 ntBASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 RNU6-393P-201ENST00000384475 107 ntBASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 PRPS1P1-201ENST00000445305 876 ntBASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 MTND2P39-201ENST00000457230 764 ntBASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 GMFBP1-201ENST00000467831 427 ntBASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 RPS23P5-201ENST00000495419 428 ntBASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 RNU2-34P-201ENST00000516534 121 ntBASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 MIR4661-201ENST00000582720 75 ntBASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 AL022345.2-201ENST00000606307 135 ntBASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 AC008250.2-201ENST00000615261 205 ntBASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 AC008147.4-201ENST00000617570 1204 ntBASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 AL603839.4-201ENST00000624658 1005 ntBASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
CLHC1Q8NHS4 Y_RNA.224-201ENST00000364308 111 ntBASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 AC060773.1-201ENST00000421698 310 ntBASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 NDUFA5P4-201ENST00000436704 385 ntBASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 AC091874.1-201ENST00000511402 339 ntBASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 RNA5SP503-201ENST00000517047 117 ntBASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 CYCSP23-201ENST00000519781 313 ntBASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 AP005136.1-201ENST00000579765 429 ntBASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 MIR3941-201ENST00000582572 103 ntBASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 CLPTM1LP1-201ENST00000604519 484 ntBASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 AL365434.2-201ENST00000607979 234 ntBASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 MIR6504-201ENST00000613520 61 ntBASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.93□□□□□ -2.26
CLHC1Q8NHS4 RNU6-562P-201ENST00000362731 107 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 Y_RNA.132-201ENST00000363421 102 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 Y_RNA.191-201ENST00000363972 113 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 Y_RNA.269-201ENST00000364685 89 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 RNU6-1029P-201ENST00000384109 107 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 RNU6-1026P-201ENST00000384465 108 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 RNU6-1127P-201ENST00000384580 107 ntBASIC0.92□□□□□ -2.26
CLHC1Q8NHS4 SNORA16.2-201ENST00000390991 127 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms