Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 CYP3A52P-201ENST00000563326 91 ntBASIC1.18□□□□□ -2.22
CCDC148Q8NFR7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC148Q8NFR7 AC245884.10-201ENST00000597355 337 ntBASIC1.18□□□□□ -2.22
CCDC148Q8NFR7 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.18□□□□□ -2.22
CCDC148Q8NFR7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.18□□□□□ -2.22
CCDC148Q8NFR7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
CCDC148Q8NFR7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CCDC148Q8NFR7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC148Q8NFR7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC148Q8NFR7 MRPL35P3-201ENST00000421557 364 ntBASIC1.17□□□□□ -2.22
CCDC148Q8NFR7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC1.17□□□□□ -2.22
CCDC148Q8NFR7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.17□□□□□ -2.22
CCDC148Q8NFR7 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.17□□□□□ -2.22
CCDC148Q8NFR7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC148Q8NFR7 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC148Q8NFR7 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC148Q8NFR7 AC090517.1-201ENST00000569307 266 ntBASIC1.17□□□□□ -2.22
CCDC148Q8NFR7 TMF1P1-201ENST00000576058 373 ntBASIC1.17□□□□□ -2.22
CCDC148Q8NFR7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC148Q8NFR7 AL603839.4-201ENST00000624658 1005 ntBASIC1.17□□□□□ -2.22
CCDC148Q8NFR7 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 MIR337-201ENST00000362281 93 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 RNU4-38P-201ENST00000364472 129 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 RNU6-827P-201ENST00000365553 106 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 RNU4-48P-201ENST00000365559 182 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 SNORA22-201ENST00000383907 134 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 Y_RNA.504-201ENST00000384481 104 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 SNORA22C-201ENST00000384614 134 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 SNORD70.1-201ENST00000391007 85 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 MIR300-201ENST00000401138 83 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 SNX2P2-201ENST00000424553 323 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 AC132479.1-201ENST00000449160 144 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 AL031274.1-201ENST00000450334 232 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 AC022364.2-201ENST00000457963 554 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 HMGN1P7-201ENST00000491722 313 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 AC069113.1-201ENST00000517763 267 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 AC106038.2-201ENST00000520706 568 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 AC103996.1-201ENST00000555468 102 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 MIR4703-201ENST00000577728 79 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 AC090616.2-202ENST00000584248 222 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 RSL24D1P11-201ENST00000591045 491 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 HSPE1P19-201ENST00000603327 295 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 CTHRC1P1-201ENST00000605383 469 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 AC068787.1-201ENST00000623908 691 ntBASIC1.16□□□□□ -2.22
CCDC148Q8NFR7 RNU6-562P-201ENST00000362731 107 ntBASIC1.15□□□□□ -2.23
CCDC148Q8NFR7 MIR208B-201ENST00000401172 77 ntBASIC1.15□□□□□ -2.23
CCDC148Q8NFR7 AC012306.1-201ENST00000423267 114 ntBASIC1.15□□□□□ -2.23
CCDC148Q8NFR7 USP9YP28-201ENST00000435142 589 ntBASIC1.15□□□□□ -2.23
CCDC148Q8NFR7 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC148Q8NFR7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CCDC148Q8NFR7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.15□□□□□ -2.23
CCDC148Q8NFR7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.15□□□□□ -2.23
CCDC148Q8NFR7 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.15□□□□□ -2.23
CCDC148Q8NFR7 RNU6-1041P-201ENST00000516254 102 ntBASIC1.15□□□□□ -2.23
CCDC148Q8NFR7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC148Q8NFR7 AC103810.9-201ENST00000606688 112 ntBASIC1.15□□□□□ -2.23
CCDC148Q8NFR7 AP001506.1-201ENST00000615444 211 ntBASIC1.15□□□□□ -2.23
CCDC148Q8NFR7 AC008147.4-201ENST00000617570 1204 ntBASIC1.15□□□□□ -2.23
CCDC148Q8NFR7 AL359697.1-201ENST00000624879 587 ntBASIC1.15□□□□□ -2.23
CCDC148Q8NFR7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 SNORA72.2-201ENST00000365028 127 ntBASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 RNU6-877P-201ENST00000383868 107 ntBASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 Y_RNA.399-201ENST00000383955 105 ntBASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 SNORA29-201ENST00000384183 140 ntBASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 RNU6-1127P-201ENST00000384580 107 ntBASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 SNORA16.2-201ENST00000390991 127 ntBASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 ISCA1P6-201ENST00000427740 390 ntBASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 MTND1P22-201ENST00000510572 951 ntBASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 AC011406.1-201ENST00000512440 370 ntBASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 AL512310.8-201ENST00000550183 120 ntBASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 MIR548AB-201ENST00000584917 84 ntBASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 AC011458.1-201ENST00000604034 617 ntBASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 AC002044.1-201ENST00000606707 158 ntBASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 AC004492.1-201ENST00000607036 742 ntBASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 SNORA43.4-201ENST00000629559 138 ntBASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CCDC148Q8NFR7 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 RNU6-266P-201ENST00000364225 107 ntBASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 MIR1-2-201ENST00000384961 85 ntBASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 COX6CP10-201ENST00000416832 224 ntBASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 AL033528.1-201ENST00000453780 140 ntBASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 RPS29P15-201ENST00000458329 171 ntBASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 AL163973.1-201ENST00000484753 577 ntBASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 AC091874.1-201ENST00000511402 339 ntBASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 RNU6-1129P-201ENST00000515964 104 ntBASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 RNA5SP404-201ENST00000517118 132 ntBASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 AC016256.1-201ENST00000547971 354 ntBASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 NIFKP6-201ENST00000598115 845 ntBASIC1.13□□□□□ -2.23
CCDC148Q8NFR7 AC245014.2-201ENST00000603689 287 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms