Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 MIR3149-201ENST00000584629 83 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 RMST_6.1-201ENST00000611980 203 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 AC007792.1-201ENST00000623023 402 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 AC243829.7-201ENST00000633081 225 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 AC099654.7-201ENST00000635788 2127 ntBASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.5□□□□□ -2.01
CLIP4Q8N3C7 Z75746.1-201ENST00000440243 2080 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 RNU5B-2P-201ENST00000363036 113 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 RNU6-1285P-201ENST00000363480 105 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 RNU4-50P-201ENST00000364361 141 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 U3.13-201ENST00000364804 214 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 SNORA63.7-201ENST00000365579 123 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 RNU1-138P-201ENST00000384093 164 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 SNORA36A-201ENST00000384221 132 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 RNU6-17P-201ENST00000384245 107 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 Y_RNA.512-201ENST00000384518 102 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 RNU6-18P-201ENST00000384527 107 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 MIR147B-201ENST00000390185 80 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 RN7SKP61-201ENST00000410642 295 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 AC138623.1-201ENST00000418060 216 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 AL358075.3-201ENST00000426289 226 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 RPL23AP58-201ENST00000440453 469 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 AL135938.1-201ENST00000443141 297 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 U8.22-201ENST00000459141 133 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 RPL31P41-201ENST00000477967 372 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 AC016256.1-201ENST00000547971 354 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 AC079600.2-201ENST00000550076 130 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 AC105137.2-201ENST00000569073 466 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 AL159153.1-201ENST00000619688 317 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 U4.1-201ENST00000620349 87 ntBASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
CLIP4Q8N3C7 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 AC092268.1-201ENST00000342691 405 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 MIR6073-201ENST00000352083 89 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 RNU6-222P-201ENST00000362438 107 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 SNORD115-32-201ENST00000364079 82 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 Y_RNA.452-201ENST00000384202 108 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 Y_RNA.471-201ENST00000384312 102 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 AL590556.1-201ENST00000423231 483 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 CR769767.1-201ENST00000436337 346 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 DYNLT3P2-201ENST00000442517 295 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 AC073910.1-201ENST00000445047 438 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 OSTCP8-201ENST00000445117 448 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 AC107032.1-201ENST00000485945 480 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 AC132942.1-201ENST00000486753 483 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 GZMAP1-201ENST00000503054 631 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 SCARNA17.1-201ENST00000516211 143 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 SCARNA17.2-201ENST00000516334 143 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 SNORA31.11-201ENST00000516528 139 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 RNA5SP402-201ENST00000517148 110 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 AL161670.1-201ENST00000554348 137 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 AC021231.3-201ENST00000558497 370 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 AC090617.3-201ENST00000573670 475 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 MIR5571-201ENST00000577998 113 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 MIR3671-201ENST00000580455 88 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 AL390123.1-201ENST00000603216 237 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 SCARNA17.4-201ENST00000614296 143 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 AL450472.1-202ENST00000637286 180 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.48□□□□□ -2.01
CLIP4Q8N3C7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 Y_RNA.27-201ENST00000362540 103 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 Y_RNA.193-201ENST00000363979 102 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 Y_RNA.214-201ENST00000364201 112 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 RNU6-541P-201ENST00000384709 110 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 MIR153-2-201ENST00000385225 87 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 AC087499.2-201ENST00000432861 149 ntBASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.47□□□□□ -2.01
CLIP4Q8N3C7 SNORA31.6-201ENST00000516241 130 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 178.3 ms