Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 HMGN2P18-201ENST00000450680 270 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 HMGB1P29-201ENST00000505659 499 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 CCDC34P1-201ENST00000507441 517 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 AC108078.1-201ENST00000508073 725 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 AC079140.3-201ENST00000511111 550 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 AC091874.1-201ENST00000511402 339 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 Y_RNA.673-201ENST00000516306 88 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 RNA5SP490-201ENST00000517141 136 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 MTND4P7-201ENST00000523876 130 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 AP003033.1-201ENST00000527244 415 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 AC012507.3-201ENST00000603556 477 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 AC090582.1-201ENST00000636321 199 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 AL450472.1-202ENST00000637286 180 ntBASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
CDKL3Q8IVW4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 SNORD114-6-201ENST00000364393 72 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 Y_RNA.255-201ENST00000364581 97 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 RNU6-26P-201ENST00000383985 107 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 Y_RNA.504-201ENST00000384481 104 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 RNY3P9-201ENST00000384727 106 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 RNA5SP219-201ENST00000390940 113 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 RNU1-78P-201ENST00000391248 165 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AL606923.1-201ENST00000406616 190 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 CDK8P2-201ENST00000415020 547 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 NCOR1P3-201ENST00000420479 303 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 RPL23AP95-201ENST00000426806 265 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AL133396.1-201ENST00000432048 687 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AL606489.2-201ENST00000433886 234 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 RNU6-333P-201ENST00000459117 107 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AC132942.1-201ENST00000486753 483 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AC005840.1-201ENST00000498412 377 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 TRMT112P2-201ENST00000512910 132 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AC090115.3-201ENST00000553218 849 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AC109446.1-201ENST00000566172 220 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 MIR3923-201ENST00000579521 83 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AC078795.3-201ENST00000602913 472 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AP001836.1-201ENST00000604675 523 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 HULC.1-201ENST00000612720 240 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 MIR8074-201ENST00000615081 81 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AL590240.4-201ENST00000616908 390 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 AC009509.4-201ENST00000619202 509 ntBASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDKL3Q8IVW4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AC092268.1-201ENST00000342691 405 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 RNA5SP493-201ENST00000364115 91 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 SNORA26.3-201ENST00000391119 136 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 RNA5SP201-201ENST00000410316 124 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AC015922.2-201ENST00000435593 184 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AC098826.2-201ENST00000452011 651 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 MTCO2P18-201ENST00000457151 658 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 RPL31P3-201ENST00000458430 332 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AC099513.1-201ENST00000490423 301 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AC016632.1-201ENST00000503994 196 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AC025465.3-201ENST00000510570 311 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AC091133.4-201ENST00000511142 308 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 RNVU1-2-201ENST00000516326 135 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AC087441.2-201ENST00000529141 262 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 MIR3169-201ENST00000578032 83 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 MIR4424-201ENST00000585257 86 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AC005786.1-201ENST00000588553 154 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 AC022079.1-201ENST00000621546 602 ntBASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CDKL3Q8IVW4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 SNORD73A-201ENST00000386062 65 ntBASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 Y_RNA.582-201ENST00000391023 95 ntBASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 SNORA40.6-201ENST00000391153 128 ntBASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 DEFB108C-201ENST00000400154 252 ntBASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 RNU4-55P-201ENST00000410731 137 ntBASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 TPT1P7-201ENST00000458300 517 ntBASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 RNU7-138P-201ENST00000459479 64 ntBASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 AC005908.1-201ENST00000468701 347 ntBASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 AC005741.1-201ENST00000511094 432 ntBASIC1.3□□□□□ -2.2
CDKL3Q8IVW4 SNORA40.12-201ENST00000516329 111 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms