Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.66□□□□□ -1.98
HERC6Q8IVU3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HERC6Q8IVU3 Z82209.1-201ENST00000422141 2135 ntBASIC2.65□□□□□ -1.98
HERC6Q8IVU3 MTND5P9-201ENST00000503854 1755 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 RNU6-601P-201ENST00000384540 107 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 Y_RNA.535-201ENST00000384612 99 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 RNU6-1072P-201ENST00000384703 107 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 RNU6-443P-201ENST00000384780 107 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 Y_RNA.597-201ENST00000410463 100 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 SNORD5.1-201ENST00000458800 75 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.65□□□□□ -1.99
HERC6Q8IVU3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 Y_RNA.675-201ENST00000516389 149 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 Y_RNA.676-201ENST00000516393 96 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 AL356575.1-201ENST00000603008 283 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 AC046143.2-201ENST00000609789 160 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 SNORA43.4-201ENST00000629559 138 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 MIR1302-1-201ENST00000637932 143 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 ZNF72P-201ENST00000425869 1908 ntBASIC2.65□□□□□ -1.99
HERC6Q8IVU3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
HERC6Q8IVU3 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
HERC6Q8IVU3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HERC6Q8IVU3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.64□□□□□ -1.99
HERC6Q8IVU3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HERC6Q8IVU3 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HERC6Q8IVU3 Y_RNA.67-201ENST00000362870 100 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 U3.9-201ENST00000363823 204 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 RNU1-91P-201ENST00000364746 163 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 RNU6-546P-201ENST00000383991 107 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 SNORA29-201ENST00000384183 140 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 RNU6-1274P-201ENST00000384557 107 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 AL079342.1-201ENST00000401460 267 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 MTCYBP2-201ENST00000407745 171 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 MIR1294-201ENST00000408503 142 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.64□□□□□ -1.99
HERC6Q8IVU3 RPS12P2-201ENST00000439728 269 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 UBE2V1P7-201ENST00000446395 340 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 AC132942.1-201ENST00000486753 483 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 RNU6-307P-201ENST00000516743 106 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 Y_RNA.708-201ENST00000516950 96 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.64□□□□□ -1.99
HERC6Q8IVU3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.64□□□□□ -1.99
HERC6Q8IVU3 AC113139.1-201ENST00000605049 239 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 AC016727.1-205ENST00000605437 569 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.64□□□□□ -1.99
HERC6Q8IVU3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
HERC6Q8IVU3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.63□□□□□ -1.99
HERC6Q8IVU3 RNU4-15P-201ENST00000362613 141 ntBASIC2.63□□□□□ -1.99
HERC6Q8IVU3 MIR208B-201ENST00000401172 77 ntBASIC2.63□□□□□ -1.99
HERC6Q8IVU3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.63□□□□□ -1.99
HERC6Q8IVU3 USP9YP30-201ENST00000430729 455 ntBASIC2.63□□□□□ -1.99
HERC6Q8IVU3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.63□□□□□ -1.99
HERC6Q8IVU3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.63□□□□□ -1.99
HERC6Q8IVU3 AC021146.2-201ENST00000504736 556 ntBASIC2.63□□□□□ -1.99
HERC6Q8IVU3 HSPE1P18-201ENST00000517602 280 ntBASIC2.63□□□□□ -1.99
HERC6Q8IVU3 CBX3P7-201ENST00000532876 502 ntBASIC2.63□□□□□ -1.99
HERC6Q8IVU3 AC109446.1-201ENST00000566172 220 ntBASIC2.63□□□□□ -1.99
HERC6Q8IVU3 RPL17P51-201ENST00000605218 238 ntBASIC2.63□□□□□ -1.99
HERC6Q8IVU3 AC018462.2-201ENST00000605375 395 ntBASIC2.63□□□□□ -1.99
HERC6Q8IVU3 AC103810.6-201ENST00000606708 136 ntBASIC2.63□□□□□ -1.99
HERC6Q8IVU3 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.63□□□□□ -1.99
HERC6Q8IVU3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.63□□□□□ -1.99
HERC6Q8IVU3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.63□□□□□ -1.99
HERC6Q8IVU3 Z82195.2-201ENST00000612348 18351 ntBASIC2.63□□□□□ -1.99
HERC6Q8IVU3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.63□□□□□ -1.99
HERC6Q8IVU3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
HERC6Q8IVU3 RNU4-9P-201ENST00000364951 139 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 RNA5SP210-201ENST00000391034 120 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 RNU6-1050P-201ENST00000410388 107 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 RNU2-32P-201ENST00000411193 191 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 RNU6-1304P-201ENST00000411374 106 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.62□□□□□ -1.99
HERC6Q8IVU3 Y_RNA.632-201ENST00000459189 102 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.62□□□□□ -1.99
HERC6Q8IVU3 AC018630.3-201ENST00000542637 96 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.62□□□□□ -1.99
HERC6Q8IVU3 EIF4A1P12-201ENST00000551910 141 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 MIR5092-201ENST00000583139 88 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 AC005899.2-201ENST00000584353 90 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 AC009318.2-201ENST00000610917 651 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.62□□□□□ -1.99
HERC6Q8IVU3 PCGEM1.1-201ENST00000613431 131 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 AC005520.5-201ENST00000613926 164 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 AC010297.1-201ENST00000623948 149 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 AL450472.1-202ENST00000637286 180 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 AC007336.1-201ENST00000576365 3828 ntBASIC2.62□□□□□ -1.99
HERC6Q8IVU3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HERC6Q8IVU3 MTND5P6-201ENST00000422338 1798 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.61□□□□□ -1.99
HERC6Q8IVU3 Y_RNA.2-201ENST00000362330 96 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 SNORD50.1-201ENST00000362987 71 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 RNA5SP456-201ENST00000364002 114 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 Y_RNA.384-201ENST00000383909 102 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 Y_RNA.419-201ENST00000384041 102 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 SNORA36A-201ENST00000384221 132 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 RNU6-174P-201ENST00000410406 106 ntBASIC2.61□□□□□ -1.99
HERC6Q8IVU3 SUMO1P4-201ENST00000429430 302 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms