Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RN7SKP299-201ENST00000606679 301 ntBASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 AC009994.1-201ENST00000606889 253 ntBASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 AC139792.3-201ENST00000623525 224 ntBASIC1.49□□□□□ -2.17
CCDC50Q8IVM0 RNU6-112P-201ENST00000363599 104 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 RNU6-60P-201ENST00000364792 103 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 MIR549A-201ENST00000385268 96 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 SNORD37.1-201ENST00000390968 65 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 RNU6-1093P-201ENST00000391194 107 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 RNU6-174P-201ENST00000410406 106 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 MTND3P9-201ENST00000429526 346 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 MTATP6P17-201ENST00000431030 672 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 AC099677.2-201ENST00000436385 175 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 AC091435.1-201ENST00000505442 584 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 RNA5SP401-201ENST00000515920 127 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 RNU6-189P-201ENST00000516120 101 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 CENPUP1-201ENST00000526649 1202 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 AC025423.5-201ENST00000550230 219 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 DNAJC19P9-201ENST00000555084 351 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 AC092747.3-201ENST00000603769 301 ntBASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
CCDC50Q8IVM0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 MTND5P9-201ENST00000503854 1755 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 RNU6-545P-201ENST00000362681 104 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 RNU4-13P-201ENST00000364019 141 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 SNORD31B-201ENST00000364977 69 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 SNORA18.2-201ENST00000383865 132 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 RNU6-38P-201ENST00000384085 107 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 RNU6-296P-201ENST00000384608 107 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 Y_RNA.582-201ENST00000391023 95 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 RPL21P111-201ENST00000418453 477 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 AL121890.1-201ENST00000435457 205 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 AC015922.2-201ENST00000435593 184 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 MTCO1P44-201ENST00000441935 243 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 AC010531.2-201ENST00000465012 153 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 RNU6-1069P-201ENST00000516612 133 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 MIR3198-2-201ENST00000577868 80 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 AP005136.1-201ENST00000579765 429 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 RMST_6.1-201ENST00000611980 203 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 AC005520.5-201ENST00000613926 164 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 AC103705.1-201ENST00000619013 241 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 AC068792.1-201ENST00000621354 417 ntBASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC50Q8IVM0 RNU1-76P-201ENST00000362903 159 ntBASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 RNU6-1317P-201ENST00000364582 104 ntBASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 RNU4-66P-201ENST00000365199 138 ntBASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 RNU6-338P-201ENST00000383888 105 ntBASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 MIR30A-201ENST00000385092 71 ntBASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 AC016925.1-201ENST00000458303 298 ntBASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 AC025465.4-201ENST00000513422 638 ntBASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 MIR4303-201ENST00000581299 66 ntBASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 MIR3611-201ENST00000584484 83 ntBASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 AC010620.1-201ENST00000601088 1102 ntBASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 AL357078.3-201ENST00000607528 618 ntBASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 AC083806.3-201ENST00000614016 455 ntBASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 AC091812.1-201ENST00000432235 1948 ntBASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.46□□□□□ -2.18
CCDC50Q8IVM0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 AL159152.1-201ENST00000635019 2587 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 RNU6-862P-201ENST00000362804 105 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 U8.1-201ENST00000362843 134 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 RNU1-17P-201ENST00000363022 152 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 SNORA69-201ENST00000383895 132 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 RNU6-1119P-201ENST00000384349 108 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 MIR150-201ENST00000385048 84 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 MIR764-201ENST00000390811 85 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 RNA5SP213-201ENST00000391031 106 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 AL591806.2-201ENST00000433122 173 ntBASIC1.45□□□□□ -2.18
CCDC50Q8IVM0 HMGB1P18-201ENST00000438801 619 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 210.8 ms