Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
USP48Q86UV5 AC096638.1-201ENST00000444678 216 ntBASIC3.92□□□□□ -1.78
USP48Q86UV5 RPL23AP67-201ENST00000465341 474 ntBASIC3.92□□□□□ -1.78
USP48Q86UV5 HMGB1P35-201ENST00000503360 598 ntBASIC3.92□□□□□ -1.78
USP48Q86UV5 RNU5F-2P-201ENST00000516066 82 ntBASIC3.92□□□□□ -1.78
USP48Q86UV5 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.92□□□□□ -1.78
USP48Q86UV5 RNA5SP54-201ENST00000516951 92 ntBASIC3.92□□□□□ -1.78
USP48Q86UV5 AC093023.1-201ENST00000547375 507 ntBASIC3.92□□□□□ -1.78
USP48Q86UV5 CYP4A27P-201ENST00000567218 190 ntBASIC3.92□□□□□ -1.78
USP48Q86UV5 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.92□□□□□ -1.78
USP48Q86UV5 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.92□□□□□ -1.78
USP48Q86UV5 AC005296.1-201ENST00000616145 209 ntBASIC3.92□□□□□ -1.78
USP48Q86UV5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
USP48Q86UV5 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
USP48Q86UV5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP48Q86UV5 RNU6-529P-201ENST00000363383 104 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 RNU6-200P-201ENST00000364743 107 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 RNU6-338P-201ENST00000383888 105 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 RNU6-1062P-201ENST00000383908 107 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 Y_RNA.416-201ENST00000384014 113 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 Y_RNA.478-201ENST00000384358 107 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 MIR10B-201ENST00000385011 110 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 RNA5SP213-201ENST00000391031 106 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 RNU6-159P-201ENST00000391080 106 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.91□□□□□ -1.78
USP48Q86UV5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.91□□□□□ -1.78
USP48Q86UV5 RNU6-1012P-201ENST00000516606 109 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 MIR3186-201ENST00000577404 85 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 MIR5695-201ENST00000579717 85 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 AL512605.2-201ENST00000592972 256 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 AL034555.1-201ENST00000604816 211 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 Y_RNA.772-201ENST00000606692 102 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 U6.104-201ENST00000637979 90 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USP48Q86UV5 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP48Q86UV5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.91□□□□□ -1.78
USP48Q86UV5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP48Q86UV5 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP48Q86UV5 MAPK10-322ENST00000641485 4530 ntBASIC3.91□□□□□ -1.78
USP48Q86UV5 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.9□□□□□ -1.78
USP48Q86UV5 AL109809.4-201ENST00000603520 2185 ntBASIC3.9□□□□□ -1.78
USP48Q86UV5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
USP48Q86UV5 AC017071.1-201ENST00000564407 2204 ntBASIC3.9□□□□□ -1.78
USP48Q86UV5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.9□□□□□ -1.78
USP48Q86UV5 MIR148B-201ENST00000362252 99 ntBASIC3.9□□□□□ -1.79
USP48Q86UV5 RNU6-799P-201ENST00000363567 107 ntBASIC3.9□□□□□ -1.79
USP48Q86UV5 Y_RNA.237-201ENST00000364439 102 ntBASIC3.9□□□□□ -1.79
USP48Q86UV5 SNORD58.1-201ENST00000391313 66 ntBASIC3.9□□□□□ -1.79
USP48Q86UV5 WARS2P1-201ENST00000429678 537 ntBASIC3.9□□□□□ -1.79
USP48Q86UV5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.9□□□□□ -1.79
USP48Q86UV5 AC112771.1-201ENST00000463581 102 ntBASIC3.9□□□□□ -1.79
USP48Q86UV5 RPL36AP48-201ENST00000485521 314 ntBASIC3.9□□□□□ -1.79
USP48Q86UV5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.9□□□□□ -1.79
USP48Q86UV5 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.9□□□□□ -1.79
USP48Q86UV5 RNU1-143P-201ENST00000516296 146 ntBASIC3.9□□□□□ -1.79
USP48Q86UV5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.9□□□□□ -1.79
USP48Q86UV5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.9□□□□□ -1.79
USP48Q86UV5 U1.23-201ENST00000610293 146 ntBASIC3.9□□□□□ -1.79
USP48Q86UV5 RNU1-68P-201ENST00000615382 146 ntBASIC3.9□□□□□ -1.79
USP48Q86UV5 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.9□□□□□ -1.79
USP48Q86UV5 U1.39-201ENST00000621562 146 ntBASIC3.9□□□□□ -1.79
USP48Q86UV5 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP48Q86UV5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP48Q86UV5 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
USP48Q86UV5 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.9□□□□□ -1.79
USP48Q86UV5 MAPK10-362ENST00000641864 4484 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP48Q86UV5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
USP48Q86UV5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
USP48Q86UV5 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP48Q86UV5 MIR335-201ENST00000362173 94 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 Y_RNA.40-201ENST00000362645 93 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 RNU6-280P-201ENST00000364145 104 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 RNU1-57P-201ENST00000384491 166 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 Y_RNA.515-201ENST00000384535 112 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 MIR487A-201ENST00000385009 80 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 AL139095.1-201ENST00000404326 391 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 AC009414.1-201ENST00000427200 443 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 AL353705.1-201ENST00000433468 480 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.89□□□□□ -1.79
USP48Q86UV5 AC068657.1-201ENST00000520807 306 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.89□□□□□ -1.79
USP48Q86UV5 UBL5P4-201ENST00000562584 236 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 MIR3923-201ENST00000579521 83 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.89□□□□□ -1.79
USP48Q86UV5 AC009779.6-201ENST00000603972 165 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 AC240442.1-201ENST00000616055 283 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.89□□□□□ -1.79
USP48Q86UV5 AC110079.1-202ENST00000635213 138 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.89□□□□□ -1.79
USP48Q86UV5 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
USP48Q86UV5 AL021368.2-201ENST00000606125 5352 ntBASIC3.89□□□□□ -1.79
USP48Q86UV5 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
USP48Q86UV5 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.88□□□□□ -1.79
USP48Q86UV5 RNA5SP383-201ENST00000362934 120 ntBASIC3.88□□□□□ -1.79
USP48Q86UV5 RNU5F-3P-201ENST00000363767 117 ntBASIC3.88□□□□□ -1.79
USP48Q86UV5 RNU6-318P-201ENST00000384283 103 ntBASIC3.88□□□□□ -1.79
USP48Q86UV5 MIR186-201ENST00000384988 86 ntBASIC3.88□□□□□ -1.79
USP48Q86UV5 MIR208B-201ENST00000401172 77 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms