Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 EIF4A1P12-201ENST00000551910 141 ntBASIC4.53□□□□□ -1.68
SH3RF1Q7Z6J0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.53□□□□□ -1.68
SH3RF1Q7Z6J0 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.53□□□□□ -1.68
SH3RF1Q7Z6J0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SH3RF1Q7Z6J0 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.53□□□□□ -1.68
SH3RF1Q7Z6J0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SH3RF1Q7Z6J0 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.53□□□□□ -1.69
SH3RF1Q7Z6J0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 Y_RNA.35-201ENST00000362601 101 ntBASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 U3.9-201ENST00000363823 204 ntBASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 RNY3P5-201ENST00000384127 102 ntBASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 AL139281.1-201ENST00000422120 335 ntBASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 AC005300.1-201ENST00000428401 373 ntBASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 SRIP1-201ENST00000489235 288 ntBASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 RN7SL323P-201ENST00000494712 295 ntBASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 RNU6-928P-201ENST00000516876 104 ntBASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 MIR4298-201ENST00000584380 73 ntBASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 MIR6868-201ENST00000611215 58 ntBASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 AC073308.1-201ENST00000623696 305 ntBASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.52□□□□□ -1.69
SH3RF1Q7Z6J0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 MIR450A1-201ENST00000362262 91 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 Y_RNA.280-201ENST00000364765 112 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 U8.6-201ENST00000364939 135 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 SNORD116-21-201ENST00000384507 92 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 SNORA26.2-201ENST00000390922 122 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 RNA5SP239-201ENST00000410218 129 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 RNA5SP129-201ENST00000410276 118 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 RNA5SP201-201ENST00000410316 124 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 AL161651.1-201ENST00000440882 223 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 AL441985.1-201ENST00000457727 251 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 RPL29P14-201ENST00000495837 428 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 RNU6-537P-201ENST00000517277 103 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 GNRHR2P1-201ENST00000555315 631 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 AL360157.1-201ENST00000565962 87 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 AC025754.2-201ENST00000606491 432 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 U6.115-201ENST00000636045 103 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 CENPCP1-201ENST00000533085 2578 ntBASIC4.51□□□□□ -1.69
SH3RF1Q7Z6J0 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 MIR183-201ENST00000384958 110 ntBASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 RNU6-1275P-201ENST00000391087 107 ntBASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 Y_RNA.584-201ENST00000391090 114 ntBASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 RNU4-43P-201ENST00000410628 137 ntBASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 AC083863.1-201ENST00000438811 231 ntBASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 AL031737.1-201ENST00000450125 223 ntBASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 AP003327.1-201ENST00000529684 127 ntBASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 AC025627.2-201ENST00000576220 160 ntBASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.5□□□□□ -1.69
SH3RF1Q7Z6J0 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 SNORA60-201ENST00000362396 134 ntBASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 SNORD35B-201ENST00000363660 87 ntBASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 U3.8-201ENST00000363675 217 ntBASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 MIR218-2-201ENST00000385006 110 ntBASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 SNORA48.5-201ENST00000391143 135 ntBASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 LINC00901.1-201ENST00000617252 152 ntBASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 U6.105-201ENST00000637379 88 ntBASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SH3RF1Q7Z6J0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SH3RF1Q7Z6J0 UBE3AP2-201ENST00000429033 2259 ntBASIC4.48□□□□□ -1.69
SH3RF1Q7Z6J0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.48□□□□□ -1.69
SH3RF1Q7Z6J0 SNORA31-201ENST00000362607 130 ntBASIC4.48□□□□□ -1.69
SH3RF1Q7Z6J0 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.48□□□□□ -1.69
SH3RF1Q7Z6J0 SNORA18.2-201ENST00000383865 132 ntBASIC4.48□□□□□ -1.69
SH3RF1Q7Z6J0 RNU6-383P-201ENST00000410864 94 ntBASIC4.48□□□□□ -1.69
SH3RF1Q7Z6J0 AC004866.1-201ENST00000411748 78 ntBASIC4.48□□□□□ -1.69
SH3RF1Q7Z6J0 RNU2-44P-201ENST00000516795 194 ntBASIC4.48□□□□□ -1.69
SH3RF1Q7Z6J0 IGKV2D-19-201ENST00000523346 262 ntBASIC4.48□□□□□ -1.69
SH3RF1Q7Z6J0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.48□□□□□ -1.69
SH3RF1Q7Z6J0 MIR3922-201ENST00000585192 84 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms