Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC096649.2-201ENST00000416186 393 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 AL135790.2-201ENST00000437701 267 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF43Q68DV7 RPS29P31-201ENST00000446147 164 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.91□□□□□ -1.78
RNF43Q68DV7 AP004371.1-201ENST00000525240 214 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 AP001328.1-201ENST00000528550 176 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.91□□□□□ -1.78
RNF43Q68DV7 AL391813.1-201ENST00000603098 260 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 SNORA62.6-201ENST00000606322 83 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 AP001340.1-201ENST00000624405 217 ntBASIC3.91□□□□□ -1.78
RNF43Q68DV7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RNF43Q68DV7 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.91□□□□□ -1.78
RNF43Q68DV7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
RNF43Q68DV7 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.91□□□□□ -1.78
RNF43Q68DV7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.78
RNF43Q68DV7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
RNF43Q68DV7 AC134026.1-201ENST00000623249 2239 ntBASIC3.9□□□□□ -1.78
RNF43Q68DV7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RNF43Q68DV7 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
RNF43Q68DV7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
RNF43Q68DV7 RNU6-727P-201ENST00000363592 107 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 RNU6-1141P-201ENST00000364520 107 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 RNU6-1180P-201ENST00000364935 107 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 U3.15-201ENST00000365398 212 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 RN7SKP61-201ENST00000410642 295 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 RPL26P27-201ENST00000414397 437 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 AC010285.1-201ENST00000470580 392 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 AC106707.2-201ENST00000484182 374 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 FCF1P8-201ENST00000510322 597 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 RAC1P2-201ENST00000511164 579 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 RNU6-589P-201ENST00000516485 107 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 AC136628.3-201ENST00000521868 290 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 AC021231.3-201ENST00000558497 370 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 AC006380.1-201ENST00000603598 186 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 AL359198.2-201ENST00000611836 194 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 AC006065.5-201ENST00000623427 349 ntBASIC3.9□□□□□ -1.79
RNF43Q68DV7 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.9□□□□□ -1.79
RNF43Q68DV7 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.9□□□□□ -1.79
RNF43Q68DV7 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.9□□□□□ -1.79
RNF43Q68DV7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF43Q68DV7 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RNF43Q68DV7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF43Q68DV7 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF43Q68DV7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF43Q68DV7 ZNF702P-202ENST00000434269 1966 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 BPY2DP-201ENST00000422208 265 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 AL590383.1-201ENST00000428602 75 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF43Q68DV7 SNORA71B-202ENST00000439232 272 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 AL121914.1-201ENST00000450188 156 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 AC245047.8-201ENST00000456455 284 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 RPS29P2-201ENST00000479278 136 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 RPL32P34-201ENST00000486380 400 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 TRBV12-2-201ENST00000489763 344 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 RNU5E-3P-201ENST00000515913 68 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 RN7SKP18-201ENST00000516005 275 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 RNU1-103P-201ENST00000516502 125 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 AC090049.2-201ENST00000550377 109 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 MTND5P34-201ENST00000568888 325 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.89□□□□□ -1.79
RNF43Q68DV7 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.89□□□□□ -1.79
RNF43Q68DV7 AC023043.3-201ENST00000593113 385 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 AL137849.1-201ENST00000604767 169 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 U7.2-201ENST00000607576 63 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 RMST_8.1-201ENST00000610287 165 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.89□□□□□ -1.79
RNF43Q68DV7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF43Q68DV7 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
RNF43Q68DV7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF43Q68DV7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RNF43Q68DV7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF43Q68DV7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
RNF43Q68DV7 AC010329.5-201ENST00000623497 2174 ntBASIC3.89□□□□□ -1.79
RNF43Q68DV7 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RNF43Q68DV7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.89□□□□□ -1.79
RNF43Q68DV7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RNF43Q68DV7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF43Q68DV7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RNF43Q68DV7 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
RNF43Q68DV7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RNF43Q68DV7 RNY1P11-201ENST00000363759 113 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 RNU6-1048P-201ENST00000364054 107 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 Y_RNA.309-201ENST00000365046 111 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 MIR184-201ENST00000384962 84 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 RNA5SP89-201ENST00000410300 108 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 RPS26P42-201ENST00000413485 326 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RNF43Q68DV7 AC244098.2-201ENST00000422068 99 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 AC012306.1-201ENST00000423267 114 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC3.88□□□□□ -1.79
RNF43Q68DV7 SNORD108-201ENST00000459332 71 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 AC146507.2-201ENST00000460608 476 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.88□□□□□ -1.79
RNF43Q68DV7 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.88□□□□□ -1.79
RNF43Q68DV7 SNORA70.16-201ENST00000516390 95 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 RN7SKP209-201ENST00000516888 304 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 Y_RNA.712-201ENST00000517011 92 ntBASIC3.88□□□□□ -1.79
RNF43Q68DV7 RNU2-12P-201ENST00000517216 168 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms