Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF20Q5VTR2 snoU13.28-201ENST00000459235 104 ntBASIC4.46□□□□□ -1.7
RNF20Q5VTR2 Y_RNA.686-201ENST00000516548 134 ntBASIC4.46□□□□□ -1.7
RNF20Q5VTR2 MIR5006-201ENST00000583027 110 ntBASIC4.46□□□□□ -1.7
RNF20Q5VTR2 AL391813.1-201ENST00000603098 260 ntBASIC4.46□□□□□ -1.7
RNF20Q5VTR2 AC005562.2-201ENST00000618264 111 ntBASIC4.46□□□□□ -1.7
RNF20Q5VTR2 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF20Q5VTR2 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF20Q5VTR2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
RNF20Q5VTR2 AC007656.2-201ENST00000624902 4547 ntBASIC4.46□□□□□ -1.7
RNF20Q5VTR2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNF20Q5VTR2 CEP170P1-201ENST00000502249 4587 ntBASIC4.46□□□□□ -1.7
RNF20Q5VTR2 AP001486.2-201ENST00000561652 5113 ntBASIC4.46□□□□□ -1.7
RNF20Q5VTR2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF20Q5VTR2 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
RNF20Q5VTR2 AC110774.1-201ENST00000623567 2018 ntBASIC4.45□□□□□ -1.7
RNF20Q5VTR2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF20Q5VTR2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF20Q5VTR2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF20Q5VTR2 RNU6-1325P-201ENST00000364905 105 ntBASIC4.45□□□□□ -1.7
RNF20Q5VTR2 Y_RNA.337-201ENST00000365312 102 ntBASIC4.45□□□□□ -1.7
RNF20Q5VTR2 RNU6-969P-201ENST00000383900 105 ntBASIC4.45□□□□□ -1.7
RNF20Q5VTR2 SNORD37.2-201ENST00000391075 66 ntBASIC4.45□□□□□ -1.7
RNF20Q5VTR2 CYCSP48-201ENST00000417124 323 ntBASIC4.45□□□□□ -1.7
RNF20Q5VTR2 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF20Q5VTR2 HIGD1AP1-201ENST00000550979 275 ntBASIC4.45□□□□□ -1.7
RNF20Q5VTR2 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF20Q5VTR2 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF20Q5VTR2 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF20Q5VTR2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RNF20Q5VTR2 SNORA18.2-201ENST00000383865 132 ntBASIC4.44□□□□□ -1.7
RNF20Q5VTR2 RNU6-19P-201ENST00000384718 107 ntBASIC4.44□□□□□ -1.7
RNF20Q5VTR2 RNU6-376P-201ENST00000384731 106 ntBASIC4.44□□□□□ -1.7
RNF20Q5VTR2 MIR30B-201ENST00000384850 88 ntBASIC4.44□□□□□ -1.7
RNF20Q5VTR2 RNU6-710P-201ENST00000410424 105 ntBASIC4.44□□□□□ -1.7
RNF20Q5VTR2 PTGES3P4-201ENST00000426243 356 ntBASIC4.44□□□□□ -1.7
RNF20Q5VTR2 AL121914.1-201ENST00000450188 156 ntBASIC4.44□□□□□ -1.7
RNF20Q5VTR2 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF20Q5VTR2 AC112693.2-201ENST00000556538 232 ntBASIC4.44□□□□□ -1.7
RNF20Q5VTR2 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.44□□□□□ -1.7
RNF20Q5VTR2 AC027176.1-201ENST00000560204 514 ntBASIC4.44□□□□□ -1.7
RNF20Q5VTR2 TCL6_2.1-201ENST00000615162 119 ntBASIC4.44□□□□□ -1.7
RNF20Q5VTR2 AC068205.3-201ENST00000636385 468 ntBASIC4.44□□□□□ -1.7
RNF20Q5VTR2 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF20Q5VTR2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF20Q5VTR2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF20Q5VTR2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF20Q5VTR2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RNF20Q5VTR2 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF20Q5VTR2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF20Q5VTR2 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF20Q5VTR2 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF20Q5VTR2 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF20Q5VTR2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RNF20Q5VTR2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF20Q5VTR2 Y_RNA.172-201ENST00000363765 102 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 Y_RNA.341-201ENST00000365341 102 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 MIR539-201ENST00000365690 78 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 MT-TT-201ENST00000387460 66 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 RNA5SP201-201ENST00000410316 124 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 RNA5SP504-201ENST00000410676 117 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 AC023141.4-201ENST00000412031 328 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF20Q5VTR2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF20Q5VTR2 RNU6-344P-201ENST00000516635 111 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 RNU6-1231P-201ENST00000517185 103 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 EIF4A1P12-201ENST00000551910 141 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.43□□□□□ -1.7
RNF20Q5VTR2 AC087499.8-201ENST00000578406 226 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 RN7SL703P-201ENST00000578485 302 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 MIR3609-201ENST00000582661 80 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF20Q5VTR2 RPS15AP11-201ENST00000594193 385 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 AC091152.3-201ENST00000604227 325 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 AL137843.1-201ENST00000605078 385 ntBASIC4.43□□□□□ -1.7
RNF20Q5VTR2 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF20Q5VTR2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.43□□□□□ -1.7
RNF20Q5VTR2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF20Q5VTR2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF20Q5VTR2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.42□□□□□ -1.7
RNF20Q5VTR2 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RNF20Q5VTR2 RNU4-15P-201ENST00000362613 141 ntBASIC4.42□□□□□ -1.7
RNF20Q5VTR2 RNU6-80P-201ENST00000384195 107 ntBASIC4.42□□□□□ -1.7
RNF20Q5VTR2 SNORA1.3-201ENST00000384676 136 ntBASIC4.42□□□□□ -1.7
RNF20Q5VTR2 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RNF20Q5VTR2 HMGN2P20-201ENST00000437531 273 ntBASIC4.42□□□□□ -1.7
RNF20Q5VTR2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.42□□□□□ -1.7
RNF20Q5VTR2 MIR5187-201ENST00000583479 76 ntBASIC4.42□□□□□ -1.7
RNF20Q5VTR2 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.42□□□□□ -1.7
RNF20Q5VTR2 AP000553.6-201ENST00000641242 118 ntBASIC4.42□□□□□ -1.7
RNF20Q5VTR2 MAPK10-372ENST00000641954 3413 ntBASIC4.42□□□□□ -1.7
RNF20Q5VTR2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RNF20Q5VTR2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RNF20Q5VTR2 Y_RNA.243-201ENST00000364481 109 ntBASIC4.41□□□□□ -1.7
RNF20Q5VTR2 RNU6-407P-201ENST00000365280 104 ntBASIC4.41□□□□□ -1.7
RNF20Q5VTR2 MIR616-201ENST00000385293 97 ntBASIC4.41□□□□□ -1.7
RNF20Q5VTR2 AL355497.1-201ENST00000406262 551 ntBASIC4.41□□□□□ -1.7
RNF20Q5VTR2 AL139247.1-201ENST00000422768 325 ntBASIC4.41□□□□□ -1.7
RNF20Q5VTR2 RNU7-141P-201ENST00000459304 62 ntBASIC4.41□□□□□ -1.7
RNF20Q5VTR2 RNU1-61P-201ENST00000516107 151 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms