Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 RNU1-20P-201ENST00000363314 162 ntBASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 RNY1P11-201ENST00000363759 113 ntBASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 AP002088.1-201ENST00000382740 395 ntBASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 RPL23AP48-201ENST00000406913 488 ntBASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 SNORA79-201ENST00000408376 140 ntBASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 MIR1271-201ENST00000408537 86 ntBASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 RNA5SP89-201ENST00000410300 108 ntBASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 RNA5SP120-201ENST00000410900 112 ntBASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 RN7SKP46-201ENST00000515942 234 ntBASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 RPL17P51-201ENST00000605218 238 ntBASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 MIR7151-201ENST00000617477 60 ntBASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 AC139713.2-215ENST00000641428 5037 ntBASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.54□□□□□ -1.68
PRPF38BQ5VTL8 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 MIR586-201ENST00000385035 97 ntBASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 SNORA75.5-201ENST00000391291 81 ntBASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 Y_RNA.622-201ENST00000411091 108 ntBASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 COTL1P1-201ENST00000422309 375 ntBASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 RN7SKP18-201ENST00000516005 275 ntBASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 RNU7-115P-201ENST00000516433 55 ntBASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 RNU5F-4P-201ENST00000516581 114 ntBASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 AC090142.3-201ENST00000519012 385 ntBASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 AC005868.1-201ENST00000536421 331 ntBASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 AC090049.2-201ENST00000550377 109 ntBASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 MIR4672-201ENST00000583126 81 ntBASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PRPF38BQ5VTL8 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 Y_RNA.124-201ENST00000363339 93 ntBASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 HSPE1P26-201ENST00000405341 275 ntBASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 RNU5E-3P-201ENST00000515913 68 ntBASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 RNA5SP309-201ENST00000516670 106 ntBASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 MTND5P34-201ENST00000568888 325 ntBASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 AC022655.2-201ENST00000577280 318 ntBASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 MIR8069-1-201ENST00000616627 86 ntBASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 MIR8069-2-201ENST00000621412 86 ntBASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 AC006386.2-201ENST00000624491 75 ntBASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 AC012005.1-201ENST00000624575 75 ntBASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PRPF38BQ5VTL8 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 LINC01355-201ENST00000566551 5444 ntBASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 RNA5SP307-201ENST00000362863 116 ntBASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 RNU6-915P-201ENST00000364943 103 ntBASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 RNY3P5-201ENST00000384127 102 ntBASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 MIR1185-2-201ENST00000408687 86 ntBASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 RN7SL271P-201ENST00000487601 295 ntBASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 RNU6-168P-201ENST00000516189 101 ntBASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 CYCSP40-201ENST00000575927 294 ntBASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 YPEL5P2-201ENST00000605553 359 ntBASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 UBE3AP2-201ENST00000429033 2259 ntBASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.51□□□□□ -1.69
PRPF38BQ5VTL8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF38BQ5VTL8 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF38BQ5VTL8 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.5□□□□□ -1.69
PRPF38BQ5VTL8 SNORA51.4-201ENST00000364993 124 ntBASIC4.5□□□□□ -1.69
PRPF38BQ5VTL8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
PRPF38BQ5VTL8 MIR873-201ENST00000401120 77 ntBASIC4.5□□□□□ -1.69
PRPF38BQ5VTL8 AL158823.1-201ENST00000418441 478 ntBASIC4.5□□□□□ -1.69
PRPF38BQ5VTL8 CYCSP49-201ENST00000420810 319 ntBASIC4.5□□□□□ -1.69
PRPF38BQ5VTL8 HSPE1P13-201ENST00000451143 297 ntBASIC4.5□□□□□ -1.69
PRPF38BQ5VTL8 RNU6-1337P-201ENST00000516525 95 ntBASIC4.5□□□□□ -1.69
PRPF38BQ5VTL8 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF38BQ5VTL8 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms