Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 APOOP3-201ENST00000536787 586 ntBASIC2.25□□□□□ -2.05
LRIF1Q5T3J3 FRG2DP-202ENST00000566967 323 ntBASIC2.25□□□□□ -2.05
LRIF1Q5T3J3 AL355375.2-201ENST00000574825 175 ntBASIC2.25□□□□□ -2.05
LRIF1Q5T3J3 SNRPGP17-201ENST00000603780 214 ntBASIC2.25□□□□□ -2.05
LRIF1Q5T3J3 AC133104.2-201ENST00000615272 193 ntBASIC2.25□□□□□ -2.05
LRIF1Q5T3J3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LRIF1Q5T3J3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LRIF1Q5T3J3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.25□□□□□ -2.05
LRIF1Q5T3J3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LRIF1Q5T3J3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 MIR208A-201ENST00000362287 71 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 SNORD114-30-201ENST00000364448 72 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 RNU5E-4P-201ENST00000364931 120 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 RNU6-234P-201ENST00000365229 104 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 RNU6-17P-201ENST00000384245 107 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 RNU6-18P-201ENST00000384527 107 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 MIR32-201ENST00000384965 70 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 MIR320B2-201ENST00000408479 138 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 Y_RNA.604-201ENST00000410574 102 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 AC063976.3-201ENST00000426849 329 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 Z82188.1-201ENST00000436709 154 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 AC107222.1-201ENST00000510899 637 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 SNORA31.11-201ENST00000516528 139 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 RNA5SP384-201ENST00000516615 116 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 RNA5SP82-201ENST00000516707 92 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 AC090517.1-201ENST00000569307 266 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 MIR5701-3-201ENST00000578890 82 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 MIR5694-201ENST00000581190 76 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 MIR5701-1-201ENST00000585138 82 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 SNRPGP20-201ENST00000604477 205 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 AC005014.2-201ENST00000607795 599 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 MIR5701-2-201ENST00000615634 82 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 MIR1248-201ENST00000629190 106 ntBASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.24□□□□□ -2.05
LRIF1Q5T3J3 BX322639.1-202ENST00000423987 2213 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 RNU1-76P-201ENST00000362903 159 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 RNY1P16-201ENST00000363063 111 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 MIR128-1-201ENST00000384921 82 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 SNORA12.2-201ENST00000391040 156 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 SNORA11-201ENST00000408789 128 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 AC096664.2-201ENST00000411843 406 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 AL035666.1-201ENST00000446195 348 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 AL513328.1-201ENST00000446460 224 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 Y_RNA.653-201ENST00000459091 95 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 ANXA2P1-201ENST00000505539 926 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 RNU6-965P-201ENST00000516721 96 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 RNA5SP137-201ENST00000516833 135 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 GTF3AP2-201ENST00000557014 266 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 MIR3126-201ENST00000577443 74 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 AC026271.5-201ENST00000577873 130 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 AC103810.6-201ENST00000606708 136 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 AC100812.1-201ENST00000607622 580 ntBASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.23□□□□□ -2.05
LRIF1Q5T3J3 Y_RNA.48-201ENST00000362710 103 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 Y_RNA.333-201ENST00000365274 102 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 RNU6-310P-201ENST00000384655 107 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 RNU6-331P-201ENST00000384724 107 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 SNORA80E-201ENST00000384744 137 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 RNU6-700P-201ENST00000391043 107 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 SNORA75.6-201ENST00000391318 127 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 AL357139.1-201ENST00000407792 426 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 SRIP3-201ENST00000413200 219 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 EDDM3CP-201ENST00000415977 425 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 MTCO2P27-201ENST00000420740 428 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 COTL1P1-201ENST00000422309 375 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 MTCYBP10-201ENST00000424905 650 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 AL139109.1-201ENST00000455491 297 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 AC026436.1-201ENST00000510537 270 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 AC093303.1-201ENST00000514549 295 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 SNORA4.4-201ENST00000515921 135 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 SCARNA16.2-201ENST00000516520 172 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 AC016727.2-201ENST00000603988 621 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 AL033523.1-201ENST00000605153 153 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 MIR7106-201ENST00000612419 65 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 TCL6_2.1-201ENST00000615162 119 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 AC005562.2-201ENST00000618264 111 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 AL359697.1-201ENST00000624879 587 ntBASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LRIF1Q5T3J3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms