Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 UCA1.1-201ENST00000620952 75 ntBASIC3.64□□□□□ -1.83
SNAP47Q5SQN1 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.64□□□□□ -1.83
SNAP47Q5SQN1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNAP47Q5SQN1 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
SNAP47Q5SQN1 RNU4-80P-201ENST00000363200 141 ntBASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 Y_RNA.270-201ENST00000364693 104 ntBASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 MIR591-201ENST00000385290 95 ntBASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 AC009963.1-201ENST00000417265 157 ntBASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 RPL31P41-201ENST00000477967 372 ntBASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 RPL31P61-201ENST00000496160 376 ntBASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 RN7SKP18-201ENST00000516005 275 ntBASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 RNU1-117P-201ENST00000517041 158 ntBASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 AC024405.2-202ENST00000532731 184 ntBASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 AL512605.2-201ENST00000592972 256 ntBASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 AC011921.3-201ENST00000605540 361 ntBASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SNAP47Q5SQN1 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 Y_RNA.150-201ENST00000363562 102 ntBASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 Y_RNA.180-201ENST00000363867 113 ntBASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 SNORA11.1-201ENST00000408133 129 ntBASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 RNA5SP208-201ENST00000516156 78 ntBASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 MIR3145-201ENST00000580727 82 ntBASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 MIR5187-201ENST00000583479 76 ntBASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 IPO8P1-201ENST00000455509 3109 ntBASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.62□□□□□ -1.83
SNAP47Q5SQN1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 AC091564.4-201ENST00000533934 2194 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 RNA5SP119-201ENST00000362715 117 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 SNORD32B-201ENST00000364460 84 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 RNA5SP51-201ENST00000364750 119 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 RNU6-662P-201ENST00000384253 104 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 MIR29B2-201ENST00000385055 81 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 MIR199A2-201ENST00000385289 110 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 SNORD2.1-201ENST00000458762 69 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 Y_RNA.638-201ENST00000459374 113 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 RAC1P2-201ENST00000511164 579 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 RAC1P5-201ENST00000512182 576 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 RNU6-191P-201ENST00000516295 94 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 RNU2-12P-201ENST00000517216 168 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 MIR3922-201ENST00000585192 84 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 DEFB117-201ENST00000602356 141 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 Z83818.1-201ENST00000603584 150 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 AC006380.1-201ENST00000603598 186 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 U3.45-201ENST00000607547 219 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
SNAP47Q5SQN1 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 RNU6-486P-201ENST00000363116 107 ntBASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 Y_RNA.217-201ENST00000364214 105 ntBASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 RNU6-454P-201ENST00000364292 107 ntBASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 RNA5SP139-201ENST00000364340 117 ntBASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 SNORA67.2-201ENST00000384300 149 ntBASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 RNU1-101P-201ENST00000391171 127 ntBASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 Y_RNA.641-201ENST00000459414 105 ntBASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 SCARNA11.3-201ENST00000517276 130 ntBASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 AC008739.2-201ENST00000597006 317 ntBASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 AC008873.1-201ENST00000625051 138 ntBASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 U6.98-201ENST00000637157 84 ntBASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 AP003122.5-201ENST00000527668 3766 ntBASIC3.6□□□□□ -1.83
SNAP47Q5SQN1 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms