Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 AL137843.1-201ENST00000605078 385 ntBASIC3.29□□□□□ -1.88
CCDC178Q5BJE1 AC130454.1-201ENST00000622948 401 ntBASIC3.29□□□□□ -1.88
CCDC178Q5BJE1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC178Q5BJE1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 RNU5B-2P-201ENST00000363036 113 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 RNU6-770P-201ENST00000363929 105 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 Y_RNA.319-201ENST00000365138 92 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 SNORA18.3-201ENST00000384122 132 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 RNU6-748P-201ENST00000384648 107 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 MIR9-1-201ENST00000385198 89 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 RNU6-750P-201ENST00000390946 107 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 BMS1P22-201ENST00000414726 313 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 AC004383.1-201ENST00000438135 289 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 AC105272.1-201ENST00000438604 198 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 AP001324.2-201ENST00000461163 319 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 AC090525.1-201ENST00000479116 478 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 RNU6-570P-201ENST00000517051 105 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 UBL5P4-201ENST00000562584 236 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 AC011476.5-201ENST00000615594 130 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 AC233263.6-201ENST00000631132 1963 ntBASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC178Q5BJE1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.28□□□□□ -1.89
CCDC178Q5BJE1 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 AC092268.1-201ENST00000342691 405 ntBASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 RNU6-1159P-201ENST00000362933 107 ntBASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 Y_RNA.188-201ENST00000363952 111 ntBASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 SNORD115-32-201ENST00000364079 82 ntBASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 RN7SKP61-201ENST00000410642 295 ntBASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 RNU6-130P-201ENST00000411112 103 ntBASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 WARS2P1-201ENST00000429678 537 ntBASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 RNU6-1271P-201ENST00000517049 105 ntBASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 AC021231.3-201ENST00000558497 370 ntBASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 ZNF861P-201ENST00000588126 639 ntBASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 RPS15AP11-201ENST00000594193 385 ntBASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 AC073410.2-201ENST00000603240 332 ntBASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 MIR8062-201ENST00000621515 85 ntBASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.27□□□□□ -1.89
CCDC178Q5BJE1 AC002543.1-201ENST00000299783 1954 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 RNU6-487P-201ENST00000365430 104 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 Y_RNA.458-201ENST00000384240 102 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 MIR549A-201ENST00000385268 96 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 RNA5SP354-201ENST00000391247 136 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 AL138827.1-201ENST00000402666 306 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 MIR1302-6-201ENST00000408466 90 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 RNA5SP21-201ENST00000410917 96 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 Y_RNA.618-201ENST00000410949 107 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 RNA5SP492-201ENST00000411330 114 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 AC078809.1-201ENST00000427601 140 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 AC112771.1-201ENST00000463581 102 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 AC091826.1-201ENST00000514065 313 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 SNORA9.3-201ENST00000516383 129 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 AP002770.2-201ENST00000543613 532 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 AC093023.1-201ENST00000547375 507 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 AC023824.2-201ENST00000566185 400 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 MIR5571-201ENST00000577998 113 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 AC005296.1-201ENST00000616145 209 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 SNORD98-201ENST00000636377 67 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 AC010680.1-201ENST00000590024 3590 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.26□□□□□ -1.89
CCDC178Q5BJE1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 RNA5SP361-201ENST00000362686 118 ntBASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 RNU6-1301P-201ENST00000362724 104 ntBASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 SNORD114-19-201ENST00000363072 75 ntBASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 Y_RNA.105-201ENST00000363182 111 ntBASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 RNY3P4-201ENST00000384428 101 ntBASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 Y_RNA.556-201ENST00000384677 113 ntBASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 RNU2-20P-201ENST00000410425 191 ntBASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 AC096649.2-201ENST00000416186 393 ntBASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 CBX3P6-201ENST00000430257 527 ntBASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 RPS15AP7-201ENST00000439294 405 ntBASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 RNU5B-3P-201ENST00000516601 115 ntBASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 MIR2355-201ENST00000517199 87 ntBASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 GTF3AP2-201ENST00000557014 266 ntBASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 AC137590.2-201ENST00000619709 240 ntBASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 AL450472.1-202ENST00000637286 180 ntBASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CCDC178Q5BJE1 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 RNU6-529P-201ENST00000363383 104 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 RNU1-105P-201ENST00000363470 161 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 RNU6-1285P-201ENST00000363480 105 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 Y_RNA.439-201ENST00000384119 94 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 U8.10-201ENST00000384260 133 ntBASIC3.24□□□□□ -1.89
CCDC178Q5BJE1 RPL21P38-201ENST00000418090 167 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms