Protein–RNA interactions for Protein: Q16143

SNCB, Beta-synuclein, humanhuman

Predictions only

Length 134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCBQ16143 MIR4711-201ENST00000578274 70 ntBASIC0.25□□□□□ -2.37
SNCBQ16143 AL606834.3-201ENST00000602615 496 ntBASIC0.25□□□□□ -2.37
SNCBQ16143 RNU6-6P-201ENST00000606623 107 ntBASIC0.25□□□□□ -2.37
SNCBQ16143 AC009994.1-201ENST00000606889 253 ntBASIC0.25□□□□□ -2.37
SNCBQ16143 AC005520.5-201ENST00000613926 164 ntBASIC0.25□□□□□ -2.37
SNCBQ16143 AC093913.1-201ENST00000614178 329 ntBASIC0.25□□□□□ -2.37
SNCBQ16143 AL121895.2-201ENST00000619558 447 ntBASIC0.25□□□□□ -2.37
SNCBQ16143 RNU6-433P-201ENST00000363216 104 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 U3.4-201ENST00000363352 213 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 RNU6-1237P-201ENST00000384777 107 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 RNU1-119P-201ENST00000391122 165 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 MIR936-201ENST00000401264 98 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.24□□□□□ -2.37
SNCBQ16143 MTCO2P12-201ENST00000427426 682 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.24□□□□□ -2.37
SNCBQ16143 AC233266.1-201ENST00000454518 96 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 AL163973.1-201ENST00000484753 577 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 AC112206.4-201ENST00000515142 405 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 SNORA70.12-201ENST00000516084 153 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 RNU6-123P-201ENST00000516163 102 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 RNU6-1003P-201ENST00000517099 105 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 AC107934.1-201ENST00000522215 217 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 AC013828.2-201ENST00000532487 235 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 AC007834.2-201ENST00000536310 343 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 AC123904.2-201ENST00000548059 300 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.24□□□□□ -2.37
SNCBQ16143 TMF1P1-201ENST00000576058 373 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.24□□□□□ -2.37
SNCBQ16143 Z98751.3-201ENST00000604447 521 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 AL158032.1-201ENST00000605401 106 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 AC242852.1-201ENST00000612151 96 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 MESTIT1_1.1-201ENST00000618871 140 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 MIR6734-201ENST00000621166 68 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 AL513423.1-201ENST00000621695 132 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 AC244015.1-201ENST00000622301 99 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 AC068787.1-201ENST00000623908 691 ntBASIC0.24□□□□□ -2.37
SNCBQ16143 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
SNCBQ16143 SNORD32A-201ENST00000364805 84 ntBASIC0.23□□□□□ -2.37
SNCBQ16143 RNU6-418P-201ENST00000384035 107 ntBASIC0.23□□□□□ -2.37
SNCBQ16143 RNU6-378P-201ENST00000384324 107 ntBASIC0.23□□□□□ -2.37
SNCBQ16143 RNU6-348P-201ENST00000384386 107 ntBASIC0.23□□□□□ -2.37
SNCBQ16143 RNA5SP109-201ENST00000391010 116 ntBASIC0.23□□□□□ -2.37
SNCBQ16143 MIR300-201ENST00000401138 83 ntBASIC0.23□□□□□ -2.37
SNCBQ16143 RNU6-607P-201ENST00000411283 108 ntBASIC0.23□□□□□ -2.37
SNCBQ16143 AL133396.1-201ENST00000432048 687 ntBASIC0.23□□□□□ -2.37
SNCBQ16143 HMGN2P34-201ENST00000437647 269 ntBASIC0.23□□□□□ -2.37
SNCBQ16143 RPEP5-201ENST00000441137 268 ntBASIC0.23□□□□□ -2.37
SNCBQ16143 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.23□□□□□ -2.37
SNCBQ16143 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.23□□□□□ -2.37
SNCBQ16143 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.23□□□□□ -2.37
SNCBQ16143 AC080078.2-201ENST00000603766 501 ntBASIC0.23□□□□□ -2.37
SNCBQ16143 PRELID3BP2-201ENST00000605362 201 ntBASIC0.23□□□□□ -2.37
SNCBQ16143 AL139022.2-201ENST00000606934 443 ntBASIC0.23□□□□□ -2.37
SNCBQ16143 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.22□□□□□ -2.37
SNCBQ16143 RNY4P16-201ENST00000364768 94 ntBASIC0.22□□□□□ -2.37
SNCBQ16143 RNU6-1335P-201ENST00000365426 107 ntBASIC0.22□□□□□ -2.37
SNCBQ16143 RNU6-692P-201ENST00000384496 107 ntBASIC0.22□□□□□ -2.37
SNCBQ16143 SNORA16.2-201ENST00000390991 127 ntBASIC0.22□□□□□ -2.37
SNCBQ16143 MIR1287-201ENST00000408492 90 ntBASIC0.22□□□□□ -2.37
SNCBQ16143 HSFY7P-201ENST00000432672 318 ntBASIC0.22□□□□□ -2.37
SNCBQ16143 USP9YP28-201ENST00000435142 589 ntBASIC0.22□□□□□ -2.37
SNCBQ16143 HSFY8P-201ENST00000437934 318 ntBASIC0.22□□□□□ -2.37
SNCBQ16143 AL606517.2-201ENST00000442855 241 ntBASIC0.22□□□□□ -2.37
SNCBQ16143 NFU1P2-201ENST00000448700 469 ntBASIC0.22□□□□□ -2.37
SNCBQ16143 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.22□□□□□ -2.37
SNCBQ16143 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.22□□□□□ -2.37
SNCBQ16143 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC0.22□□□□□ -2.37
SNCBQ16143 AC016957.1-201ENST00000534895 309 ntBASIC0.22□□□□□ -2.37
SNCBQ16143 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC0.22□□□□□ -2.37
SNCBQ16143 MIR5692A1-201ENST00000580523 69 ntBASIC0.22□□□□□ -2.37
SNCBQ16143 AC078795.3-201ENST00000602913 472 ntBASIC0.22□□□□□ -2.37
SNCBQ16143 AL356596.1-201ENST00000624230 379 ntBASIC0.22□□□□□ -2.37
SNCBQ16143 AL450472.1-202ENST00000637286 180 ntBASIC0.22□□□□□ -2.37
SNCBQ16143 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SNCBQ16143 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
SNCBQ16143 SNORD116-13-201ENST00000384408 92 ntBASIC0.21□□□□□ -2.38
SNCBQ16143 MIR518E-201ENST00000385252 88 ntBASIC0.21□□□□□ -2.38
SNCBQ16143 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.21□□□□□ -2.38
SNCBQ16143 ERHP2-201ENST00000402323 299 ntBASIC0.21□□□□□ -2.38
SNCBQ16143 RNU6-293P-201ENST00000411259 106 ntBASIC0.21□□□□□ -2.38
SNCBQ16143 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.21□□□□□ -2.38
SNCBQ16143 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.21□□□□□ -2.38
SNCBQ16143 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC0.21□□□□□ -2.38
SNCBQ16143 AL049830.1-201ENST00000468034 425 ntBASIC0.21□□□□□ -2.38
SNCBQ16143 AP000797.1-201ENST00000478870 387 ntBASIC0.21□□□□□ -2.38
SNCBQ16143 RNU6-405P-201ENST00000516637 110 ntBASIC0.21□□□□□ -2.38
SNCBQ16143 RNU6-467P-201ENST00000517027 110 ntBASIC0.21□□□□□ -2.38
SNCBQ16143 AC025627.3-201ENST00000582078 182 ntBASIC0.21□□□□□ -2.38
SNCBQ16143 AL360219.1-201ENST00000610230 366 ntBASIC0.21□□□□□ -2.38
SNCBQ16143 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.21□□□□□ -2.38
SNCBQ16143 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.21□□□□□ -2.38
SNCBQ16143 Y_RNA.116-201ENST00000363292 103 ntBASIC0.2□□□□□ -2.38
SNCBQ16143 RNY1P14-201ENST00000384426 108 ntBASIC0.2□□□□□ -2.38
SNCBQ16143 SNORA12.1-201ENST00000390873 148 ntBASIC0.2□□□□□ -2.38
SNCBQ16143 SNORA75.2-201ENST00000391138 150 ntBASIC0.2□□□□□ -2.38
SNCBQ16143 SNORA75.3-201ENST00000391231 150 ntBASIC0.2□□□□□ -2.38
SNCBQ16143 MIR1283-1-201ENST00000408494 87 ntBASIC0.2□□□□□ -2.38
SNCBQ16143 RN7SKP200-201ENST00000410564 320 ntBASIC0.2□□□□□ -2.38
SNCBQ16143 AC010154.1-201ENST00000425857 269 ntBASIC0.2□□□□□ -2.38
SNCBQ16143 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 217 ms