Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H3Q13133 AC006504.1-201ENST00000562493 3666 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NR1H3Q13133 AL136164.4-201ENST00000625013 2135 ntBASIC4.33□□□□□ -1.72
NR1H3Q13133 Z82217.1-201ENST00000625157 8149 ntBASIC4.32□□□□□ -1.72
NR1H3Q13133 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H3Q13133 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NR1H3Q13133 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.32□□□□□ -1.72
NR1H3Q13133 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H3Q13133 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H3Q13133 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NR1H3Q13133 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
NR1H3Q13133 Y_RNA.229-201ENST00000364347 113 ntBASIC4.32□□□□□ -1.72
NR1H3Q13133 MIR554-201ENST00000384874 96 ntBASIC4.32□□□□□ -1.72
NR1H3Q13133 MT-TT-201ENST00000387460 66 ntBASIC4.32□□□□□ -1.72
NR1H3Q13133 RNU6-1228P-201ENST00000391014 107 ntBASIC4.32□□□□□ -1.72
NR1H3Q13133 AL606845.1-201ENST00000404881 255 ntBASIC4.32□□□□□ -1.72
NR1H3Q13133 MIR1179-201ENST00000408703 91 ntBASIC4.32□□□□□ -1.72
NR1H3Q13133 SNORA84-201ENST00000459229 133 ntBASIC4.32□□□□□ -1.72
NR1H3Q13133 AC114982.1-201ENST00000469402 321 ntBASIC4.32□□□□□ -1.72
NR1H3Q13133 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H3Q13133 VWA8P1-201ENST00000510889 176 ntBASIC4.32□□□□□ -1.72
NR1H3Q13133 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H3Q13133 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.32□□□□□ -1.72
NR1H3Q13133 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NR1H3Q13133 TUG1_4.1-201ENST00000619464 181 ntBASIC4.32□□□□□ -1.72
NR1H3Q13133 AC006111.3-201ENST00000622137 383 ntBASIC4.32□□□□□ -1.72
NR1H3Q13133 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.32□□□□□ -1.72
NR1H3Q13133 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H3Q13133 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H3Q13133 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NR1H3Q13133 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NR1H3Q13133 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.32□□□□□ -1.72
NR1H3Q13133 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.31□□□□□ -1.72
NR1H3Q13133 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NR1H3Q13133 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NR1H3Q13133 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NR1H3Q13133 AL513302.2-201ENST00000562313 1842 ntBASIC4.31□□□□□ -1.72
NR1H3Q13133 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.31□□□□□ -1.72
NR1H3Q13133 RNU6-407P-201ENST00000365280 104 ntBASIC4.31□□□□□ -1.72
NR1H3Q13133 RNU6-728P-201ENST00000365375 104 ntBASIC4.31□□□□□ -1.72
NR1H3Q13133 AL359837.1-201ENST00000381357 287 ntBASIC4.31□□□□□ -1.72
NR1H3Q13133 YME1L1P1-201ENST00000429435 297 ntBASIC4.31□□□□□ -1.72
NR1H3Q13133 RPL23AP58-201ENST00000440453 469 ntBASIC4.31□□□□□ -1.72
NR1H3Q13133 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
NR1H3Q13133 RNU5F-4P-201ENST00000516581 114 ntBASIC4.31□□□□□ -1.72
NR1H3Q13133 RNA5SP309-201ENST00000516670 106 ntBASIC4.31□□□□□ -1.72
NR1H3Q13133 SNORA31.21-201ENST00000517180 77 ntBASIC4.31□□□□□ -1.72
NR1H3Q13133 AC023632.4-201ENST00000517783 191 ntBASIC4.31□□□□□ -1.72
NR1H3Q13133 LARP7P3-201ENST00000579888 337 ntBASIC4.31□□□□□ -1.72
NR1H3Q13133 AC006130.2-201ENST00000586202 326 ntBASIC4.31□□□□□ -1.72
NR1H3Q13133 AL606490.9-201ENST00000603331 271 ntBASIC4.31□□□□□ -1.72
NR1H3Q13133 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
NR1H3Q13133 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.31□□□□□ -1.72
NR1H3Q13133 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
NR1H3Q13133 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NR1H3Q13133 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NR1H3Q13133 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NR1H3Q13133 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NR1H3Q13133 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NR1H3Q13133 SNORA62.3-201ENST00000365110 153 ntBASIC4.3□□□□□ -1.72
NR1H3Q13133 Y_RNA.542-201ENST00000384641 111 ntBASIC4.3□□□□□ -1.72
NR1H3Q13133 RNA5SP252-201ENST00000391131 119 ntBASIC4.3□□□□□ -1.72
NR1H3Q13133 RPS4XP2-201ENST00000458402 793 ntBASIC4.3□□□□□ -1.72
NR1H3Q13133 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.3□□□□□ -1.72
NR1H3Q13133 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NR1H3Q13133 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NR1H3Q13133 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NR1H3Q13133 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NR1H3Q13133 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.29□□□□□ -1.72
NR1H3Q13133 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NR1H3Q13133 SNORA51.4-201ENST00000364993 124 ntBASIC4.29□□□□□ -1.72
NR1H3Q13133 RNU6-215P-201ENST00000365169 102 ntBASIC4.29□□□□□ -1.72
NR1H3Q13133 MIR1185-2-201ENST00000408687 86 ntBASIC4.29□□□□□ -1.72
NR1H3Q13133 RNU6-1234P-201ENST00000516877 103 ntBASIC4.29□□□□□ -1.72
NR1H3Q13133 AC008739.2-201ENST00000597006 317 ntBASIC4.29□□□□□ -1.72
NR1H3Q13133 MIR548AY-201ENST00000617669 107 ntBASIC4.29□□□□□ -1.72
NR1H3Q13133 AL354798.1-201ENST00000622505 329 ntBASIC4.29□□□□□ -1.72
NR1H3Q13133 AC068647.2-201ENST00000637380 353 ntBASIC4.29□□□□□ -1.72
NR1H3Q13133 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
NR1H3Q13133 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
NR1H3Q13133 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
NR1H3Q13133 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.28□□□□□ -1.72
NR1H3Q13133 SNORA60-201ENST00000362396 134 ntBASIC4.28□□□□□ -1.72
NR1H3Q13133 SNORD114-7-201ENST00000362520 77 ntBASIC4.28□□□□□ -1.72
NR1H3Q13133 U8.7-201ENST00000364940 136 ntBASIC4.28□□□□□ -1.72
NR1H3Q13133 Y_RNA.521-201ENST00000384560 114 ntBASIC4.28□□□□□ -1.72
NR1H3Q13133 MIR518C-201ENST00000384822 101 ntBASIC4.28□□□□□ -1.72
NR1H3Q13133 MIR708-201ENST00000390708 88 ntBASIC4.28□□□□□ -1.72
NR1H3Q13133 AC097463.2-201ENST00000421074 142 ntBASIC4.28□□□□□ -1.72
NR1H3Q13133 SNORA71B-202ENST00000439232 272 ntBASIC4.28□□□□□ -1.72
NR1H3Q13133 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC4.28□□□□□ -1.72
NR1H3Q13133 PPIAP15-201ENST00000479662 484 ntBASIC4.28□□□□□ -1.72
NR1H3Q13133 AC117454.1-201ENST00000491120 168 ntBASIC4.28□□□□□ -1.72
NR1H3Q13133 RNU6-1098P-201ENST00000516772 96 ntBASIC4.28□□□□□ -1.72
NR1H3Q13133 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.28□□□□□ -1.72
NR1H3Q13133 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.28□□□□□ -1.72
NR1H3Q13133 MIR3646-201ENST00000578301 84 ntBASIC4.28□□□□□ -1.72
NR1H3Q13133 AC020914.4-201ENST00000597690 277 ntBASIC4.28□□□□□ -1.72
NR1H3Q13133 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms