Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.49□□□□□ -1.85
SSRP1Q08945 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.49□□□□□ -1.85
SSRP1Q08945 RNA5SP361-201ENST00000362686 118 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 Y_RNA.183-201ENST00000363882 113 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 SNORA71.1-201ENST00000364523 117 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 NDUFB4P4-201ENST00000404822 243 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 AC112220.1-201ENST00000434628 355 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 RN7SL633P-201ENST00000488974 297 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 AC145146.1-201ENST00000496370 254 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.49□□□□□ -1.85
SSRP1Q08945 RN7SKP43-201ENST00000516173 320 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 RNY3P15-201ENST00000516297 97 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 RN7SKP49-201ENST00000516675 260 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 IGHV3-76-201ENST00000522465 295 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.49□□□□□ -1.85
SSRP1Q08945 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.49□□□□□ -1.85
SSRP1Q08945 Y_RNA.772-201ENST00000606692 102 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 AC099778.2-201ENST00000610904 211 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 AC130454.1-201ENST00000622948 401 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 ZNF204P-201ENST00000416749 2397 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SSRP1Q08945 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.49□□□□□ -1.85
SSRP1Q08945 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SSRP1Q08945 AC069528.2-201ENST00000624849 1991 ntBASIC3.49□□□□□ -1.85
SSRP1Q08945 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.49□□□□□ -1.85
SSRP1Q08945 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSRP1Q08945 AC093831.2-201ENST00000624393 3427 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 snoU2_19.1-201ENST00000362361 80 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 U3.9-201ENST00000363823 204 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 RNU6-770P-201ENST00000363929 105 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 Y_RNA.439-201ENST00000384119 94 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 Y_RNA.556-201ENST00000384677 113 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 RNU6-1001P-201ENST00000411265 100 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC3.48□□□□□ -1.85
SSRP1Q08945 RN7SKP57-201ENST00000517248 293 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 AC093331.1-201ENST00000521474 169 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.48□□□□□ -1.85
SSRP1Q08945 EIF4A1P12-201ENST00000551910 141 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 MYL12BP1-201ENST00000569826 507 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 MIR4659A-201ENST00000580269 81 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 RPL30P11-203ENST00000598995 310 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 AL670379.2-201ENST00000604983 252 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 AC005000.2-201ENST00000605468 310 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 AC240442.1-201ENST00000616055 283 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 SNORA50A-202ENST00000629536 136 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 MIR7515-201ENST00000637837 67 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
SSRP1Q08945 AC010329.5-201ENST00000623497 2174 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SSRP1Q08945 AL035425.3-201ENST00000564206 4996 ntBASIC3.48□□□□□ -1.85
SSRP1Q08945 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SSRP1Q08945 Y_RNA.19-201ENST00000362462 99 ntBASIC3.47□□□□□ -1.85
SSRP1Q08945 RNU6-245P-201ENST00000384020 107 ntBASIC3.47□□□□□ -1.85
SSRP1Q08945 Y_RNA.512-201ENST00000384518 102 ntBASIC3.47□□□□□ -1.85
SSRP1Q08945 SNORA46.1-201ENST00000391069 153 ntBASIC3.47□□□□□ -1.85
SSRP1Q08945 MIR320B2-201ENST00000408479 138 ntBASIC3.47□□□□□ -1.85
SSRP1Q08945 MICF-203ENST00000432679 129 ntBASIC3.47□□□□□ -1.85
SSRP1Q08945 AC117440.1-201ENST00000474107 571 ntBASIC3.47□□□□□ -1.85
SSRP1Q08945 SNORA25.14-201ENST00000516481 132 ntBASIC3.47□□□□□ -1.85
SSRP1Q08945 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.47□□□□□ -1.85
SSRP1Q08945 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.47□□□□□ -1.85
SSRP1Q08945 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.47□□□□□ -1.85
SSRP1Q08945 AL133393.1-201ENST00000603277 287 ntBASIC3.47□□□□□ -1.85
SSRP1Q08945 SNRPGP20-201ENST00000604477 205 ntBASIC3.47□□□□□ -1.85
SSRP1Q08945 MIR8057-201ENST00000620957 69 ntBASIC3.47□□□□□ -1.85
SSRP1Q08945 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SSRP1Q08945 AC000403.1-201ENST00000613696 3585 ntBASIC3.47□□□□□ -1.85
SSRP1Q08945 AC093010.3-201ENST00000570269 15214 ntBASIC3.46□□□□□ -1.85
SSRP1Q08945 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SSRP1Q08945 Y_RNA.193-201ENST00000363979 102 ntBASIC3.46□□□□□ -1.86
SSRP1Q08945 SNORA68.1-201ENST00000364537 132 ntBASIC3.46□□□□□ -1.86
SSRP1Q08945 RNU6-702P-201ENST00000364982 107 ntBASIC3.46□□□□□ -1.86
SSRP1Q08945 MIR329-1-201ENST00000385028 80 ntBASIC3.46□□□□□ -1.86
SSRP1Q08945 MRPL35P1-201ENST00000404272 572 ntBASIC3.46□□□□□ -1.86
SSRP1Q08945 SNORA11.2-201ENST00000408318 127 ntBASIC3.46□□□□□ -1.86
SSRP1Q08945 SNORD12B-201ENST00000410433 91 ntBASIC3.46□□□□□ -1.86
SSRP1Q08945 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.46□□□□□ -1.86
SSRP1Q08945 AC103975.1-201ENST00000482506 483 ntBASIC3.46□□□□□ -1.86
SSRP1Q08945 MTND4LP22-201ENST00000508209 276 ntBASIC3.46□□□□□ -1.86
SSRP1Q08945 AC010999.1-201ENST00000611856 324 ntBASIC3.46□□□□□ -1.86
SSRP1Q08945 MIR8062-201ENST00000621515 85 ntBASIC3.46□□□□□ -1.86
SSRP1Q08945 MIR7157-201ENST00000635801 60 ntBASIC3.46□□□□□ -1.86
SSRP1Q08945 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.46□□□□□ -1.86
SSRP1Q08945 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
SSRP1Q08945 MAPK10-362ENST00000641864 4484 ntBASIC3.46□□□□□ -1.86
SSRP1Q08945 Y_RNA.401-201ENST00000383965 117 ntBASIC3.45□□□□□ -1.86
SSRP1Q08945 RNU6-1328P-201ENST00000410938 106 ntBASIC3.45□□□□□ -1.86
SSRP1Q08945 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.45□□□□□ -1.86
SSRP1Q08945 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.45□□□□□ -1.86
SSRP1Q08945 AC073901.1-201ENST00000462471 408 ntBASIC3.45□□□□□ -1.86
SSRP1Q08945 AC026470.2-201ENST00000561492 181 ntBASIC3.45□□□□□ -1.86
SSRP1Q08945 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.45□□□□□ -1.86
SSRP1Q08945 AC011476.5-201ENST00000615594 130 ntBASIC3.45□□□□□ -1.86
SSRP1Q08945 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
SSRP1Q08945 MIR422A-201ENST00000362286 90 ntBASIC3.44□□□□□ -1.86
SSRP1Q08945 Y_RNA.64-201ENST00000362845 102 ntBASIC3.44□□□□□ -1.86
SSRP1Q08945 RNU6-926P-201ENST00000384075 107 ntBASIC3.44□□□□□ -1.86
SSRP1Q08945 RNU6-1145P-201ENST00000384246 107 ntBASIC3.44□□□□□ -1.86
SSRP1Q08945 MIR29B2-201ENST00000385055 81 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms