Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.47□□□□□ -2.33
CCL20P78556 AC091805.2-201ENST00000603848 235 ntBASIC0.47□□□□□ -2.33
CCL20P78556 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.47□□□□□ -2.33
CCL20P78556 AL136221.1-201ENST00000621449 509 ntBASIC0.47□□□□□ -2.33
CCL20P78556 U6.114-201ENST00000636407 96 ntBASIC0.47□□□□□ -2.33
CCL20P78556 AC018630.2-201ENST00000534866 2403 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AC023934.1-201ENST00000574529 2389 ntBASIC0.46□□□□□ -2.34
CCL20P78556 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CCL20P78556 RNU6-1287P-201ENST00000362914 107 ntBASIC0.46□□□□□ -2.34
CCL20P78556 RNU6-1200P-201ENST00000384162 107 ntBASIC0.46□□□□□ -2.34
CCL20P78556 RNU6-505P-201ENST00000384427 107 ntBASIC0.46□□□□□ -2.34
CCL20P78556 RNU6-1060P-201ENST00000384664 107 ntBASIC0.46□□□□□ -2.34
CCL20P78556 RNU6-1093P-201ENST00000391194 107 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AL117339.3-201ENST00000418733 162 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.46□□□□□ -2.34
CCL20P78556 AC012306.1-201ENST00000423267 114 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AC084290.1-201ENST00000434995 374 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AL606517.2-201ENST00000442855 241 ntBASIC0.46□□□□□ -2.34
CCL20P78556 snoU109.3-201ENST00000459477 145 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AC091951.3-201ENST00000504093 246 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AC010486.2-201ENST00000505572 483 ntBASIC0.46□□□□□ -2.34
CCL20P78556 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC0.46□□□□□ -2.34
CCL20P78556 RNU6-948P-201ENST00000516374 107 ntBASIC0.46□□□□□ -2.34
CCL20P78556 SCARNA24.1-201ENST00000516465 137 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AC024995.1-201ENST00000523014 93 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.46□□□□□ -2.34
CCL20P78556 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.46□□□□□ -2.34
CCL20P78556 AC103996.1-201ENST00000555468 102 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AF131215.7-201ENST00000602443 707 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AL513534.2-201ENST00000603836 250 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AL031281.1-201ENST00000604049 488 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.46□□□□□ -2.34
CCL20P78556 uc_338.17-201ENST00000619633 179 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AC138649.3-201ENST00000622154 254 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AC006001.4-201ENST00000622243 395 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AL049777.1-201ENST00000622740 518 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AC106754.2-201ENST00000623006 233 ntBASIC0.46□□□□□ -2.34
CCL20P78556 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.46□□□□□ -2.34
CCL20P78556 SNORD3E-202ENST00000627253 216 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AC068700.1-201ENST00000565862 3754 ntBASIC0.46□□□□□ -2.34
CCL20P78556 AL391994.1-201ENST00000254724 282 ntBASIC0.45□□□□□ -2.34
CCL20P78556 AF228730.1-201ENST00000397972 663 ntBASIC0.45□□□□□ -2.34
CCL20P78556 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.45□□□□□ -2.34
CCL20P78556 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.45□□□□□ -2.34
CCL20P78556 TIMM9P3-201ENST00000428659 274 ntBASIC0.45□□□□□ -2.34
CCL20P78556 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.45□□□□□ -2.34
CCL20P78556 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.45□□□□□ -2.34
CCL20P78556 SNRPFP4-201ENST00000456366 242 ntBASIC0.45□□□□□ -2.34
CCL20P78556 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.45□□□□□ -2.34
CCL20P78556 DEFB108E-201ENST00000524692 240 ntBASIC0.45□□□□□ -2.34
CCL20P78556 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC0.45□□□□□ -2.34
CCL20P78556 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.45□□□□□ -2.34
CCL20P78556 AL590095.2-201ENST00000604136 117 ntBASIC0.45□□□□□ -2.34
CCL20P78556 AC104458.1-201ENST00000608243 463 ntBASIC0.45□□□□□ -2.34
CCL20P78556 AC104465.1-201ENST00000611365 139 ntBASIC0.45□□□□□ -2.34
CCL20P78556 AC009159.2-201ENST00000617603 606 ntBASIC0.45□□□□□ -2.34
CCL20P78556 MIR6835-201ENST00000621552 64 ntBASIC0.45□□□□□ -2.34
CCL20P78556 AC005858.4-201ENST00000623191 700 ntBASIC0.45□□□□□ -2.34
CCL20P78556 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.45□□□□□ -2.34
CCL20P78556 SNORA43.4-201ENST00000629559 138 ntBASIC0.45□□□□□ -2.34
CCL20P78556 AC009541.1-201ENST00000438279 2662 ntBASIC0.45□□□□□ -2.34
CCL20P78556 RNU6-501P-201ENST00000364072 100 ntBASIC0.44□□□□□ -2.34
CCL20P78556 Y_RNA.287-201ENST00000364853 94 ntBASIC0.44□□□□□ -2.34
CCL20P78556 RNU4-12P-201ENST00000365233 139 ntBASIC0.44□□□□□ -2.34
CCL20P78556 Y_RNA.363-201ENST00000365529 113 ntBASIC0.44□□□□□ -2.34
CCL20P78556 RNU6-827P-201ENST00000365553 106 ntBASIC0.44□□□□□ -2.34
CCL20P78556 RNU6-969P-201ENST00000383900 105 ntBASIC0.44□□□□□ -2.34
CCL20P78556 SNORA20.2-201ENST00000383922 131 ntBASIC0.44□□□□□ -2.34
CCL20P78556 SNORA80D-201ENST00000384488 135 ntBASIC0.44□□□□□ -2.34
CCL20P78556 RNU6-906P-201ENST00000384700 70 ntBASIC0.44□□□□□ -2.34
CCL20P78556 RNA5SP467-201ENST00000391274 118 ntBASIC0.44□□□□□ -2.34
CCL20P78556 MIR1253-201ENST00000408273 105 ntBASIC0.44□□□□□ -2.34
CCL20P78556 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.44□□□□□ -2.34
CCL20P78556 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.44□□□□□ -2.34
CCL20P78556 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.44□□□□□ -2.34
CCL20P78556 SRRM1P2-201ENST00000464531 1192 ntBASIC0.44□□□□□ -2.34
CCL20P78556 MTCO3P7-201ENST00000510008 774 ntBASIC0.44□□□□□ -2.34
CCL20P78556 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.44□□□□□ -2.34
CCL20P78556 LRRC34P2-201ENST00000514850 553 ntBASIC0.44□□□□□ -2.34
CCL20P78556 SNORA31.10-201ENST00000516482 106 ntBASIC0.44□□□□□ -2.34
CCL20P78556 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.44□□□□□ -2.34
CCL20P78556 Z99497.2-201ENST00000603634 310 ntBASIC0.44□□□□□ -2.34
CCL20P78556 AP000811.1-201ENST00000603803 651 ntBASIC0.44□□□□□ -2.34
CCL20P78556 AP001836.1-201ENST00000604675 523 ntBASIC0.44□□□□□ -2.34
CCL20P78556 AC018714.1-201ENST00000605028 208 ntBASIC0.44□□□□□ -2.34
CCL20P78556 AC018645.2-201ENST00000609151 472 ntBASIC0.44□□□□□ -2.34
CCL20P78556 GHRLOS.1-201ENST00000610995 70 ntBASIC0.44□□□□□ -2.34
CCL20P78556 AC138749.5-201ENST00000611461 208 ntBASIC0.44□□□□□ -2.34
CCL20P78556 AC116165.2-201ENST00000616705 206 ntBASIC0.44□□□□□ -2.34
CCL20P78556 AL603839.4-201ENST00000624658 1005 ntBASIC0.44□□□□□ -2.34
CCL20P78556 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.44□□□□□ -2.34
CCL20P78556 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CCL20P78556 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC0.44□□□□□ -2.34
CCL20P78556 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
CCL20P78556 MIR373-201ENST00000362273 69 ntBASIC0.43□□□□□ -2.34
CCL20P78556 RNU6-1080P-201ENST00000383982 107 ntBASIC0.43□□□□□ -2.34
CCL20P78556 RNU6-975P-201ENST00000384296 105 ntBASIC0.43□□□□□ -2.34
CCL20P78556 MIR549A-201ENST00000385268 96 ntBASIC0.43□□□□□ -2.34
CCL20P78556 RNU6-482P-201ENST00000391068 107 ntBASIC0.43□□□□□ -2.34
CCL20P78556 RN7SKP200-201ENST00000410564 320 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms