Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC119751.4-201ENST00000507498 357 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 MTCO3P7-201ENST00000510008 774 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 RNU6-1225P-201ENST00000516336 65 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.15□□□□□ -2.39
ABCA4P78363 AC025423.5-201ENST00000550230 219 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 SUB1P2-201ENST00000556401 297 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 MIR4645-201ENST00000583158 77 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 uc_338.34-201ENST00000617467 174 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 AC006927.4-201ENST00000639187 543 ntBASIC0.15□□□□□ -2.39
ABCA4P78363 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
ABCA4P78363 RNU6-349P-201ENST00000362402 107 ntBASIC0.14□□□□□ -2.39
ABCA4P78363 SNORD118-201ENST00000363593 134 ntBASIC0.14□□□□□ -2.39
ABCA4P78363 RNU6-45P-201ENST00000384471 107 ntBASIC0.14□□□□□ -2.39
ABCA4P78363 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.14□□□□□ -2.39
ABCA4P78363 RN7SKP142-201ENST00000411236 328 ntBASIC0.14□□□□□ -2.39
ABCA4P78363 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.14□□□□□ -2.39
ABCA4P78363 SNRPEP8-201ENST00000442866 260 ntBASIC0.14□□□□□ -2.39
ABCA4P78363 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC0.14□□□□□ -2.39
ABCA4P78363 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
ABCA4P78363 RPS26P48-201ENST00000491713 339 ntBASIC0.14□□□□□ -2.39
ABCA4P78363 Y_RNA.687-201ENST00000516558 91 ntBASIC0.14□□□□□ -2.39
ABCA4P78363 RNU6-677P-201ENST00000516914 101 ntBASIC0.14□□□□□ -2.39
ABCA4P78363 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.14□□□□□ -2.39
ABCA4P78363 AC025678.1-201ENST00000567861 338 ntBASIC0.14□□□□□ -2.39
ABCA4P78363 AC092106.3-201ENST00000611308 722 ntBASIC0.14□□□□□ -2.39
ABCA4P78363 MTND5P42-201ENST00000637720 498 ntBASIC0.14□□□□□ -2.39
ABCA4P78363 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 MIR224-201ENST00000384889 81 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 RPL22P18-201ENST00000417197 377 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 NDUFB4P10-201ENST00000452541 359 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 RPL39P39-201ENST00000455840 151 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 SRRM1P2-201ENST00000464531 1192 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.13□□□□□ -2.39
ABCA4P78363 RNU6-64P-201ENST00000517119 105 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.13□□□□□ -2.39
ABCA4P78363 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.13□□□□□ -2.39
ABCA4P78363 AC022893.3-201ENST00000607665 437 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 AC097460.3-201ENST00000623099 442 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
ABCA4P78363 Y_RNA.311-201ENST00000365068 96 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 RNU6-1335P-201ENST00000365426 107 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 RNU6-793P-201ENST00000384233 104 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 MIR214-201ENST00000385214 110 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 UBE2V1P15-201ENST00000407776 448 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 NDUFA4P2-201ENST00000489989 244 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 AC112206.4-201ENST00000515142 405 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 RNU5F-4P-201ENST00000516581 114 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 MTND1P36-201ENST00000522384 936 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.13□□□□□ -2.39
ABCA4P78363 AC016256.1-201ENST00000547971 354 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 AL158211.1-201ENST00000566763 763 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 MIR3923-201ENST00000579521 83 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 LARP7P1-201ENST00000605576 316 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 U6.42-201ENST00000618440 107 ntBASIC0.13□□□□□ -2.39
ABCA4P78363 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0.13□□□□□ -2.39
ABCA4P78363 SNORD32B-201ENST00000364460 84 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 SNORD12-201ENST00000391002 90 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 RNA5SP118-201ENST00000410385 109 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 RPS26P5-201ENST00000418544 335 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.12□□□□□ -2.39
ABCA4P78363 AP000542.1-201ENST00000448473 371 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.12□□□□□ -2.39
ABCA4P78363 Y_RNA.689-201ENST00000516589 107 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 AC109810.1-201ENST00000534066 224 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 AC116165.2-201ENST00000616705 206 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 AC009509.4-201ENST00000619202 509 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 MTND4P5-201ENST00000435821 1374 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 FCF1P10-201ENST00000407590 479 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 BTF3L4P1-201ENST00000413813 468 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.12□□□□□ -2.39
ABCA4P78363 MRPS18CP6-201ENST00000423587 223 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 AC233266.1-201ENST00000454518 96 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.12□□□□□ -2.39
ABCA4P78363 snoU13.25-201ENST00000458945 104 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.12□□□□□ -2.39
ABCA4P78363 CYCTP-201ENST00000504253 315 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 AC025465.4-201ENST00000513422 638 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 RNU6-1146P-201ENST00000516282 102 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.12□□□□□ -2.39
ABCA4P78363 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.12□□□□□ -2.39
ABCA4P78363 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.12□□□□□ -2.39
ABCA4P78363 AL357312.1-201ENST00000603879 298 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 AC242852.1-201ENST00000612151 96 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 FRG1KP-201ENST00000623592 341 ntBASIC0.12□□□□□ -2.39
ABCA4P78363 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
ABCA4P78363 MIR340-201ENST00000362125 95 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 MIR103A1-201ENST00000362165 78 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 RNU6-833P-201ENST00000363486 107 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 MIR10A-201ENST00000385043 110 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 AL355796.1-201ENST00000406706 323 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 AC244670.1-201ENST00000436879 112 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 MTCO2P7-201ENST00000446518 666 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.11□□□□□ -2.39
ABCA4P78363 AC022868.1-201ENST00000517767 391 ntBASIC0.11□□□□□ -2.39
ABCA4P78363 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.11□□□□□ -2.39
ABCA4P78363 MIR548AX-201ENST00000580117 73 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms