Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RPS29P27-201ENST00000463711 170 ntBASIC1.77□□□□□ -2.13
SRP54P61011 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SRP54P61011 ATP5EP1-201ENST00000510257 156 ntBASIC1.77□□□□□ -2.13
SRP54P61011 RPL39P5-202ENST00000512505 151 ntBASIC1.77□□□□□ -2.13
SRP54P61011 AC025465.4-201ENST00000513422 638 ntBASIC1.77□□□□□ -2.13
SRP54P61011 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.77□□□□□ -2.13
SRP54P61011 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.77□□□□□ -2.13
SRP54P61011 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.77□□□□□ -2.13
SRP54P61011 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.77□□□□□ -2.13
SRP54P61011 AC064836.2-201ENST00000609491 462 ntBASIC1.77□□□□□ -2.13
SRP54P61011 MIR8081-201ENST00000611533 95 ntBASIC1.77□□□□□ -2.13
SRP54P61011 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.77□□□□□ -2.13
SRP54P61011 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SRP54P61011 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
SRP54P61011 SNORD31B-201ENST00000364977 69 ntBASIC1.76□□□□□ -2.13
SRP54P61011 RNU6-438P-201ENST00000365561 103 ntBASIC1.76□□□□□ -2.13
SRP54P61011 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.76□□□□□ -2.13
SRP54P61011 AL627390.1-201ENST00000396055 340 ntBASIC1.76□□□□□ -2.13
SRP54P61011 RNA5SP489-201ENST00000410986 109 ntBASIC1.76□□□□□ -2.13
SRP54P61011 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.76□□□□□ -2.13
SRP54P61011 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.76□□□□□ -2.13
SRP54P61011 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.76□□□□□ -2.13
SRP54P61011 MTND3P16-201ENST00000452205 344 ntBASIC1.76□□□□□ -2.13
SRP54P61011 RNU5F-4P-201ENST00000516581 114 ntBASIC1.76□□□□□ -2.13
SRP54P61011 RNU6-250P-201ENST00000516958 103 ntBASIC1.76□□□□□ -2.13
SRP54P61011 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.76□□□□□ -2.13
SRP54P61011 GNAI2P1-201ENST00000541815 315 ntBASIC1.76□□□□□ -2.13
SRP54P61011 SCOCP1-201ENST00000554676 349 ntBASIC1.76□□□□□ -2.13
SRP54P61011 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.76□□□□□ -2.13
SRP54P61011 AL121757.2-201ENST00000611223 313 ntBASIC1.76□□□□□ -2.13
SRP54P61011 AC121333.1-201ENST00000567488 2709 ntBASIC1.76□□□□□ -2.13
SRP54P61011 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
SRP54P61011 Y_RNA.231-201ENST00000364358 102 ntBASIC1.75□□□□□ -2.13
SRP54P61011 CALM2P3-201ENST00000400429 449 ntBASIC1.75□□□□□ -2.13
SRP54P61011 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.75□□□□□ -2.13
SRP54P61011 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.75□□□□□ -2.13
SRP54P61011 TOMM22P6-201ENST00000465035 409 ntBASIC1.75□□□□□ -2.13
SRP54P61011 RPL9P9-202ENST00000466501 579 ntBASIC1.75□□□□□ -2.13
SRP54P61011 RNVU1-2-201ENST00000516326 135 ntBASIC1.75□□□□□ -2.13
SRP54P61011 RNU6-1098P-201ENST00000516772 96 ntBASIC1.75□□□□□ -2.13
SRP54P61011 SNORD60.2-201ENST00000516883 86 ntBASIC1.75□□□□□ -2.13
SRP54P61011 AC104576.1-201ENST00000524225 88 ntBASIC1.75□□□□□ -2.13
SRP54P61011 AL157687.1-201ENST00000554853 619 ntBASIC1.75□□□□□ -2.13
SRP54P61011 MIR3683-201ENST00000580847 82 ntBASIC1.75□□□□□ -2.13
SRP54P61011 AC010900.2-201ENST00000604508 210 ntBASIC1.75□□□□□ -2.13
SRP54P61011 AC103810.8-201ENST00000607347 118 ntBASIC1.75□□□□□ -2.13
SRP54P61011 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.75□□□□□ -2.13
SRP54P61011 AC068137.3-201ENST00000639191 341 ntBASIC1.75□□□□□ -2.13
SRP54P61011 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
SRP54P61011 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SRP54P61011 MIR340-201ENST00000362125 95 ntBASIC1.74□□□□□ -2.13
SRP54P61011 Y_RNA.167-201ENST00000363735 109 ntBASIC1.74□□□□□ -2.13
SRP54P61011 RNA5SP190-201ENST00000365222 118 ntBASIC1.74□□□□□ -2.13
SRP54P61011 RNU6-214P-201ENST00000384130 107 ntBASIC1.74□□□□□ -2.13
SRP54P61011 RNA5SP100-201ENST00000410903 110 ntBASIC1.74□□□□□ -2.13
SRP54P61011 RNA5SP59-201ENST00000410922 110 ntBASIC1.74□□□□□ -2.13
SRP54P61011 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.74□□□□□ -2.13
SRP54P61011 SEPT14P3-201ENST00000439401 183 ntBASIC1.74□□□□□ -2.13
SRP54P61011 SNRPEP8-201ENST00000442866 260 ntBASIC1.74□□□□□ -2.13
SRP54P61011 AL732372.2-207ENST00000445840 183 ntBASIC1.74□□□□□ -2.13
SRP54P61011 SEPT14P2-201ENST00000453405 183 ntBASIC1.74□□□□□ -2.13
SRP54P61011 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.74□□□□□ -2.13
SRP54P61011 AC016925.1-201ENST00000458303 298 ntBASIC1.74□□□□□ -2.13
SRP54P61011 RNU7-14P-201ENST00000459331 62 ntBASIC1.74□□□□□ -2.13
SRP54P61011 AC130509.1-201ENST00000464158 433 ntBASIC1.74□□□□□ -2.13
SRP54P61011 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.74□□□□□ -2.13
SRP54P61011 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.74□□□□□ -2.13
SRP54P61011 SEPT14P4-201ENST00000513445 186 ntBASIC1.74□□□□□ -2.13
SRP54P61011 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.74□□□□□ -2.13
SRP54P61011 RNA5SP458-201ENST00000516188 119 ntBASIC1.74□□□□□ -2.13
SRP54P61011 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.74□□□□□ -2.13
SRP54P61011 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.74□□□□□ -2.13
SRP54P61011 FO082796.1-201ENST00000523795 183 ntBASIC1.74□□□□□ -2.13
SRP54P61011 AC024909.2-201ENST00000553035 286 ntBASIC1.74□□□□□ -2.13
SRP54P61011 AL512360.1-201ENST00000555346 234 ntBASIC1.74□□□□□ -2.13
SRP54P61011 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.74□□□□□ -2.13
SRP54P61011 AC090517.1-201ENST00000569307 266 ntBASIC1.74□□□□□ -2.13
SRP54P61011 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.74□□□□□ -2.13
SRP54P61011 AC100830.2-201ENST00000581636 240 ntBASIC1.74□□□□□ -2.13
SRP54P61011 AC010928.2-201ENST00000588017 287 ntBASIC1.74□□□□□ -2.13
SRP54P61011 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.74□□□□□ -2.13
SRP54P61011 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.74□□□□□ -2.13
SRP54P61011 AC048344.4-201ENST00000619744 527 ntBASIC1.74□□□□□ -2.13
SRP54P61011 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.74□□□□□ -2.13
SRP54P61011 Y_RNA.140-201ENST00000363474 103 ntBASIC1.73□□□□□ -2.13
SRP54P61011 RPS26P42-201ENST00000413485 326 ntBASIC1.73□□□□□ -2.13
SRP54P61011 AC139712.2-201ENST00000424302 339 ntBASIC1.73□□□□□ -2.13
SRP54P61011 MTND3P9-201ENST00000429526 346 ntBASIC1.73□□□□□ -2.13
SRP54P61011 AL645568.3-201ENST00000433683 316 ntBASIC1.73□□□□□ -2.13
SRP54P61011 AL603825.1-201ENST00000438481 80 ntBASIC1.73□□□□□ -2.13
SRP54P61011 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.73□□□□□ -2.13
SRP54P61011 RPS23P5-201ENST00000495419 428 ntBASIC1.73□□□□□ -2.13
SRP54P61011 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.73□□□□□ -2.13
SRP54P61011 AC004492.1-201ENST00000607036 742 ntBASIC1.73□□□□□ -2.13
SRP54P61011 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.73□□□□□ -2.13
SRP54P61011 FER-210ENST00000628534 558 ntTSL 5 BASIC1.73□□□□□ -2.13
SRP54P61011 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SRP54P61011 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.73□□□□□ -2.13
SRP54P61011 RNU6-522P-201ENST00000364497 107 ntBASIC1.72□□□□□ -2.13
SRP54P61011 RNU6-1317P-201ENST00000364582 104 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms