Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.65□□□□□ -1.83
ERVFC1P60507 MIR4276-201ENST00000584832 70 ntBASIC3.65□□□□□ -1.83
ERVFC1P60507 AC020895.1-201ENST00000595362 272 ntBASIC3.65□□□□□ -1.83
ERVFC1P60507 Z83843.1-201ENST00000604070 3685 ntBASIC3.65□□□□□ -1.83
ERVFC1P60507 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ERVFC1P60507 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ERVFC1P60507 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
ERVFC1P60507 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ERVFC1P60507 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
ERVFC1P60507 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.65□□□□□ -1.83
ERVFC1P60507 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ERVFC1P60507 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
ERVFC1P60507 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
ERVFC1P60507 MTND5P35-201ENST00000557537 1720 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ERVFC1P60507 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.64□□□□□ -1.83
ERVFC1P60507 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
ERVFC1P60507 AL672296.1-201ENST00000427780 2158 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 RNU6-50P-201ENST00000362356 103 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 RNU1-140P-201ENST00000365040 165 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 RNU4-17P-201ENST00000365598 141 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 RNU6-1310P-201ENST00000384153 107 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 MIR569-201ENST00000385228 96 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 RNU6-1197P-201ENST00000391183 107 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 RNU6-257P-201ENST00000410238 98 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 RNU2-2P-201ENST00000410396 191 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.64□□□□□ -1.83
ERVFC1P60507 RAB28P5-201ENST00000427490 651 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 RNU6-625P-201ENST00000459412 107 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 AL121594.1-201ENST00000475906 575 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.64□□□□□ -1.83
ERVFC1P60507 RNU6-426P-201ENST00000516464 97 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 RNU2-4P-201ENST00000606190 192 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 U2.15-201ENST00000611544 191 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 U2.16-201ENST00000613119 191 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 U2.12-201ENST00000613778 191 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 AL162274.2-201ENST00000614406 332 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 U2.9-201ENST00000615427 191 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 U2.11-201ENST00000616345 191 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 U2.2-201ENST00000616535 191 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 U2.3-201ENST00000617785 191 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 U2.19-201ENST00000618602 191 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 RNU2-1-201ENST00000618664 191 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
ERVFC1P60507 U2.6-201ENST00000619225 191 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 U2.5-201ENST00000619465 191 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 U2.10-201ENST00000620268 191 ntBASIC3.64□□□□□ -1.83
ERVFC1P60507 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ERVFC1P60507 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ERVFC1P60507 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ERVFC1P60507 AC007256.1-201ENST00000392253 2765 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ERVFC1P60507 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ERVFC1P60507 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ERVFC1P60507 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.63□□□□□ -1.83
ERVFC1P60507 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ERVFC1P60507 Y_RNA.179-201ENST00000363844 90 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 Y_RNA.273-201ENST00000364703 102 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 RNU6-215P-201ENST00000365169 102 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 RNU6-245P-201ENST00000384020 107 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 SNORA36A-201ENST00000384221 132 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 Y_RNA.500-201ENST00000384466 111 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 RNU6-239P-201ENST00000390990 99 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 MIR888-201ENST00000401186 77 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 RNU2-54P-201ENST00000410299 190 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 ELOCP21-201ENST00000412558 336 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 HMGN2P30-201ENST00000423237 256 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 RPS15AP5-201ENST00000436276 388 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 SEPT7P4-201ENST00000437076 306 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 AL356535.1-201ENST00000440335 398 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 RPL30P12-201ENST00000474666 353 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 UBE2DNL-203ENST00000474922 222 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.63□□□□□ -1.83
ERVFC1P60507 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.63□□□□□ -1.83
ERVFC1P60507 TGIF1P1-201ENST00000558095 802 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 MIR3145-201ENST00000580727 82 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 AL451007.1-201ENST00000595491 289 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 AL356575.1-201ENST00000603008 283 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 AC004467.1-201ENST00000615678 330 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 AC092628.2-201ENST00000622492 339 ntBASIC3.63□□□□□ -1.83
ERVFC1P60507 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
ERVFC1P60507 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
ERVFC1P60507 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
ERVFC1P60507 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
ERVFC1P60507 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
ERVFC1P60507 RNU6-1285P-201ENST00000363480 105 ntBASIC3.62□□□□□ -1.83
ERVFC1P60507 RNA5SP42-201ENST00000364278 115 ntBASIC3.62□□□□□ -1.83
ERVFC1P60507 RNU6-275P-201ENST00000364910 107 ntBASIC3.62□□□□□ -1.83
ERVFC1P60507 Y_RNA.498-201ENST00000384460 102 ntBASIC3.62□□□□□ -1.83
ERVFC1P60507 Y_RNA.510-201ENST00000384511 114 ntBASIC3.62□□□□□ -1.83
ERVFC1P60507 SNORD20-201ENST00000384550 80 ntBASIC3.62□□□□□ -1.83
ERVFC1P60507 MIR186-201ENST00000384988 86 ntBASIC3.62□□□□□ -1.83
ERVFC1P60507 MIR325-201ENST00000385260 98 ntBASIC3.62□□□□□ -1.83
ERVFC1P60507 FTH1P15-201ENST00000406984 280 ntBASIC3.62□□□□□ -1.83
ERVFC1P60507 MIR1289-1-201ENST00000408836 144 ntBASIC3.62□□□□□ -1.83
ERVFC1P60507 AC012306.1-201ENST00000423267 114 ntBASIC3.62□□□□□ -1.83
ERVFC1P60507 BTF3P11-201ENST00000426582 477 ntBASIC3.62□□□□□ -1.83
ERVFC1P60507 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.62□□□□□ -1.83
ERVFC1P60507 AC244670.1-201ENST00000436879 112 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms